DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13604 and ubash3b

DIOPT Version :9

Sequence 1:NP_001262894.1 Gene:CG13604 / 42840 FlyBaseID:FBgn0039137 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001096431.1 Gene:ubash3b / 100125040 XenbaseID:XB-GENE-5757837 Length:640 Species:Xenopus tropicalis


Alignment Length:751 Identity:268/751 - (35%)
Similarity:372/751 - (49%) Gaps:141/751 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PRKSQTPTRICISKQHLTPLQTLLQMGFPRHRAEKALASTGNRGVQIASDWLLAHVNDGTLDECA 70
            |||::......|  :|.:.|:.||.||||:.||:|||||||.|.||.|.|||.:||:|..||:..
 Frog    13 PRKNRQHRAGTI--KHGSSLEILLSMGFPKARAQKALASTGGRSVQAACDWLFSHVDDPFLDDPL 75

  Fly    71 PREYIIYACPTGPFLQQLEEFWAKSRQMCGWNGAHNYVPHITLVSFFKAPDECSLQLSKALKQVV 135
            ||||::|..||||..|:|.:||.:|:||||.|.|||..|||||..||...|.....|.:||:..|
 Frog    76 PREYVLYLRPTGPLAQKLSDFWQQSKQMCGRNKAHNIFPHITLCQFFMCEDSKVDALCEALQTTV 140

  Fly   136 DMTGALLDRPLKLEPYMSQNFMGFFVAEEDANYLKRLALQYVKEVSNSIISDTYEQLDAIVACFP 200
            ....:....||.||.|:|.||:|.||.||.|..||:.|..:.              .||:|    
 Frog   141 SHWKSRFPNPLPLELYVSTNFIGLFVKEECAEVLKKFAADFA--------------ADALV---- 187

  Fly   201 WCGAVSSGTRCIPRSSRSISLEPHVKSLHLTLAYQFPQAQFNALKALVETLDASCASNWELRLYS 265
                           ...:.:|||.|.||:||||.|..:....|:.|..::|.:...:|...::|
 Frog   188 ---------------KTEVRVEPHKKQLHVTLAYHFLDSHLPTLEKLAHSIDINLGCDWVAAIFS 237

  Fly   266 RDPRLATKQVQKVVYPHNPHETDELELRIGDYIYLNTEVVDSSSDGWAEGISWLTGSTGHLPVNY 330
            ||.|....:..:|:||::|...|||||..||||:::.....|:|:||..|.|..||.:|.||.||
 Frog   238 RDIRFVNHETLQVLYPYSPQNDDELELVPGDYIFMSPVEQSSTSEGWIYGSSLATGCSGLLPENY 302

  Fly   331 TERTAESDAWTLHRVVQLSKSVASSLTSAEDLDIVDGRSISTEPDDRQNTAHPDIIEGSSFEESE 395
            ..:..|...|..|....|..:..|:..|.||                                  
 Frog   303 ITKADECGTWIFHGSYSLLNTSLSATCSLED---------------------------------- 333

  Fly   396 QSVEKYLRQTLKPCLELPSVQLLNSHNLTHQHNP---NTPTIEITTNMSSSSTSMSKQPVDEILV 457
            :.:||  ||                     |.:|   :|..:.|                     
 Frog   334 RVMEK--RQ---------------------QEDPGMGDTSALTI--------------------- 354

  Fly   458 EPPAAQPPRPDDTLSVHSDHSLHPGSLDASHAKNRKIYIMRHGERVDFTFGT-WIPYCFDEFGNY 521
               ..||.:|   |.|:|  ...||      ||.|.:::.|||||:|..||. |:..|||..|.|
 Frog   355 ---ICQPMQP---LRVNS--QTEPG------AKKRCLFVCRHGERMDVVFGKYWLSQCFDTKGKY 405

  Fly   522 MRKDLNMPKTLPRRKNSPEGWQNDSPLTNVGVYQANLIGQALLEAQVQIDHVYCSPSYRCIQTCT 586
            :|.:|||..:||:|......::.|||:|..|..||.|:|:||||:...:|.||||||.||:||..
 Frog   406 VRTNLNMLPSLPQRSGGYREYEKDSPITVFGCTQAKLVGEALLESNTAVDFVYCSPSLRCVQTAQ 470

  Fly   587 SALEGLKLTGKQKIKLEPGLFEWMAWYPSG--VPDWLTKNELTEAKFDVDLDYEPVQPASELTAR 649
            :.|:|||...|.||::|||||||..|. ||  :|.|::..||..|...||..|.|..|.|:|.  
 Frog   471 NILKGLKQENKGKIRIEPGLFEWTKWV-SGNTLPSWISPTELAAANLSVDTTYRPHIPVSKLV-- 532

  Fly   650 LKESTEQFYERNHDVILQLLEQTTG---NILVVAHATTLDTCSRQLTGGVPRSTNELRQVIHKIP 711
            :.|:.:.:..|:..|...:|.:..|   |:|:||||::||.|:|||.|...:::.:..||:.|||
 Frog   533 VSETYDTYMSRSFQVTKDILSECKGKGKNVLIVAHASSLDACTRQLQGLTSQNSKDFVQVVRKIP 597

  Fly   712 YCSLATVEQV--DGVWKLVEPECLPVTHSKNPRFEW 745
            |......|::  .|:|:|.:|..||:||.....|.|
 Frog   598 YLGFCCCEELGDTGLWQLTDPPILPLTHGPTGGFNW 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13604NP_001262894.1 UBA_UBS3B 23..60 CDD:270486 23/36 (64%)
SH3_UBASH3 275..333 CDD:212725 26/57 (46%)
His_Phos_1 494..728 CDD:278716 101/241 (42%)
ubash3bNP_001096431.1 UBA_UBS3B 28..65 CDD:270486 23/36 (64%)
SH3_UBASH3B 245..306 CDD:212869 26/60 (43%)
HP_PGM_like 377..605 CDD:132718 98/230 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 141 1.000 Domainoid score I4710
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13152
Inparanoid 1 1.050 466 1.000 Inparanoid score I1506
OMA 1 1.010 - - QHG45538
OrthoDB 1 1.010 - - D130139at33208
OrthoFinder 1 1.000 - - FOG0002396
OrthoInspector 1 1.000 - - oto103470
Panther 1 1.100 - - LDO PTHR16469
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3907
SonicParanoid 1 1.000 - - X1080
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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