DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5902 and AT2G38710

DIOPT Version :10

Sequence 1:NP_651201.1 Gene:CG5902 / 42839 FlyBaseID:FBgn0039136 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_565894.1 Gene:AT2G38710 / 818453 AraportID:AT2G38710 Length:214 Species:Arabidopsis thaliana


Alignment Length:188 Identity:92/188 - (48%)
Similarity:120/188 - (63%) Gaps:5/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DMCLFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWK---IGRDKRLRGCIGTFSAMELHHGLRE 109
            :|.::||:.|....||.:.|. |.|....:|||||||   .|.:.||||||||..|..|..|.::
plant     7 EMAVYCFDTLVSHYNNEETPP-PAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLEARRLISGFKD 70

  Fly   110 YALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRIEFL-TERGCKRTAT 173
            ||||||.:|.||.||...|||.|..:||:|.::|:|:.:|||::|.|||.|||. .|...||:||
plant    71 YALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWEVGKHGIIIEFTEPETNTKRSAT 135

  Fly   174 YLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRKSIKLTRYRSQEIQMHYKEYREY 231
            |||:|...:||.:::.||||:||.||...||...|:.|.||||:|....|||.||..|
plant   136 YLPEVPAHEGWTKIEAIDSLVRKAGYNGVITEAVRRRINLTRYQSTLFSMHYSEYLSY 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5902NP_651201.1 AMMECR1 52..221 CDD:460368 85/172 (49%)
AT2G38710NP_565894.1 AMMECR1 11..183 CDD:460368 85/172 (49%)

Return to query results.
Submit another query.