Protein Alignment CG5902 and polr2d

DIOPT Version :9

• Sequence 1: NP_001163705.1
• Gene: CG5902 / 42839
• FlyBaseID: FBgn0039136
• Length: 243
• Species: Drosophila melanogaster
• Sequence 2: NP_001016248.1
• Gene: polr2d / 549002
• XenbaseID: XB-GENE-1004238
• Length: 142
• Species: Xenopus tropicalis
• Alignment Length: 66
• Identity: 15/66 - (22%)
• Similarity: 29/66 - (43%)
• Gaps: 13/66 - (19%)

  Fly   170 RTATYLPQVATEQGWDQLQTIDS-LLRKGGYR------AAITPETRKSIKLT------RYRSQEI 221
            :|..|..:.:..:..:.:.::.| ||:|..:|      |.:.|||....|..      |:..:|:
 Frog    63 KTLNYTARFSRFKNRETIASVRSLLLQKKLHRFELACLANLCPETADEAKALIPSLEGRFEEEEL 127

  Fly   222 Q 222
            |
 Frog   128 Q 128

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5902	NP_001163705.1	AMMECR1	50..219	CDD:280112	13/61 (21%)
polr2d	NP_001016248.1	RPOL4c	24..141	CDD:128904	15/66 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1274811at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010