DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5902 and Ammecr1

DIOPT Version :9

Sequence 1:NP_001163705.1 Gene:CG5902 / 42839 FlyBaseID:FBgn0039136 Length:243 Species:Drosophila melanogaster
Sequence 2:XP_002730257.1 Gene:Ammecr1 / 501539 RGDID:1561004 Length:334 Species:Rattus norvegicus


Alignment Length:203 Identity:132/203 - (65%)
Similarity:157/203 - (77%) Gaps:1/203 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PQRFSNGHG-MKTVAVPDMCLFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKIGRDKRLRGCI 95
            |...|:..| .|.|...:||.|||:||.|.|.....|..|.|:|:.|||||||||||||||||||
  Rat   113 PSSSSSSPGSRKMVVSAEMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKIGRDKRLRGCI 177

  Fly    96 GTFSAMELHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRI 160
            ||||||.||.|||||.||||.|||||.|::|||||||..|||:|.|||:...:|||::|||||||
  Rat   178 GTFSAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRI 242

  Fly   161 EFLTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRKSIKLTRYRSQEIQMHY 225
            ||:.|:|.||||||||:||.|||||.:||||||||||||:|.||.|.||:||||||||:::.:.|
  Rat   243 EFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSY 307

  Fly   226 KEYREYQE 233
            .||..:::
  Rat   308 AEYLAHRQ 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5902NP_001163705.1 AMMECR1 50..219 CDD:280112 122/168 (73%)
Ammecr1XP_002730257.1 AMMECR1 132..302 CDD:280112 123/169 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343537
Domainoid 1 1.000 255 1.000 Domainoid score I1969
eggNOG 1 0.900 - - E1_COG2078
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68944
Inparanoid 1 1.050 273 1.000 Inparanoid score I2910
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1274811at2759
OrthoFinder 1 1.000 - - FOG0002708
OrthoInspector 1 1.000 - - otm44681
orthoMCL 1 0.900 - - OOG6_101067
Panther 1 1.100 - - LDO PTHR13016
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1811
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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