DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5902 and SPAC688.03c

DIOPT Version :9

Sequence 1:NP_001163705.1 Gene:CG5902 / 42839 FlyBaseID:FBgn0039136 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_594062.2 Gene:SPAC688.03c / 2543480 PomBaseID:SPAC688.03c Length:193 Species:Schizosaccharomyces pombe


Alignment Length:188 Identity:77/188 - (40%)
Similarity:113/188 - (60%) Gaps:14/188 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DMCLFCFEVLDCELNN---VDGPSVPVFSNDAYPLFVTWKIGR--DKRLRGCIGTFSAMELHHGL 107
            :.|.:||||:...|.:   .|..:...::. :.||||.:..|:  ||:||||||||.|..|...|
pombe     5 EYCYYCFEVVAATLEHRKVRDKWNAKSWTR-SIPLFVKFASGKGHDKQLRGCIGTFRARPLVTNL 68

  Fly   108 REYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRIEFLTERGCKRTA 172
            ..::..:||.|.||.|||..||..|...:.:|.:||.....|||::|:||:.|:| |..|.:.::
pombe    69 TYFSKQAAFCDERFRPISLGELALLECQIDLLVDFEPIDDPLDWEVGIHGVSIKF-TANGIRYSS 132

  Fly   173 TYLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRKSIKL--TRYRSQEIQMHYKEY 228
            ||||.||.||.|||.:|::||:.|.||..:|     :|:::  |||:|.||...|:||
pombe   133 TYLPSVAAEQRWDQEETLESLIHKAGYYGSI-----RSLQITATRYKSLEIGCTYEEY 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5902NP_001163705.1 AMMECR1 50..219 CDD:280112 71/175 (41%)
SPAC688.03cNP_594062.2 AMMECR1 1..193 CDD:224989 77/188 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 119 1.000 Domainoid score I1478
eggNOG 1 0.900 - - E1_COG2078
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I1424
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002708
OrthoInspector 1 1.000 - - oto100646
orthoMCL 1 0.900 - - OOG6_101067
Panther 1 1.100 - - LDO PTHR13016
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1929
SonicParanoid 1 1.000 - - X1811
TreeFam 1 0.960 - -
1211.850

Return to query results.
Submit another query.