DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31140 and rdgA

DIOPT Version :9

Sequence 1:NP_001262893.1 Gene:CG31140 / 42836 FlyBaseID:FBgn0051140 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_001259366.1 Gene:rdgA / 31826 FlyBaseID:FBgn0261549 Length:1462 Species:Drosophila melanogaster


Alignment Length:1452 Identity:340/1452 - (23%)
Similarity:514/1452 - (35%) Gaps:460/1452 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 QSKQHFLLSTPPTPTSCGSISLCHSPTPSSLTVGETSNE-------------AEQDRERDQDQPE 315
            |.:|...:...|.||:..|.|....||.::.|...|:..             |...|.|......
  Fly     2 QQQQQPSIDQLPEPTASTSNSATTKPTIATATTSTTTTSGNNFHQQLQATTAATMQRLRTTFTRS 66

  Fly   316 EEPEEENTEQDSALQLTTSTSNVIGNLQKWPSANSSLHLLYTNLFRKLGQGKRRRKRGISSGGL- 379
            ..|.....:..::|::.....:...:..:..|..:|..||...........:|..:.|.....| 
  Fly    67 RTPTGAEMKMQNSLEVPKQVRSASFDEMQLESQRASSSLLKQQSSSSASADERSSEAGFLQVPLA 131

  Fly   380 -----SPSEDEDDVDGGVCDISGGDLS-------------------------DDY---------- 404
                 |.|.|......| .|.||..|.                         ::|          
  Fly   132 AHQQRSHSFDSATASAG-SDDSGTFLEVPRRLKARRSSSTKTPPPCIHCHYLEEYERRMTAEQRY 195

  Fly   405 --DHCDV-ALRRRSLRSRQPRDVSETDYHGDAEAEAEGETVPRESCYETSDTGGELTNTD----- 461
              ||.:: ||...:..|....|..|.:.| :||.|.||.....::..||::...|..:.|     
  Fly   196 FIDHRELTALSYSNTSSEASEDEDEVEGH-NAEEEEEGSAAIEDAEEETTEAATEEADEDPRTEV 259

  Fly   462 --------DLDSSLNL---ISNLSYNSSNNSNACNVPGGATAPDARNTATTS--TTAPGKSGHAL 513
                    |.|::|.:   |.|:|..||...:...:|    ....|:|..:|  |:|....|...
  Fly   260 ESEHDHDPDDDAALEMDIRIGNMSQGSSIEESRARLP----RQMRRHTIGSSSVTSASEDEGLEG 320

  Fly   514 SVQGGRQ--------QPKT--GALAQIKPKPKPILMPKHKAQGKGGSLSSPLSNSNSSDCSSASP 568
            |..|...        ||.|  |....:.|.......|.|.....|   |.|:     |.|||.|.
  Fly   321 SDNGSPHFGNTLLPPQPTTPCGITFTLSPTNGDYPSPPHLPLDPG---SPPI-----SPCSSNSG 377

  Fly   569 SAPATLLQLS-PVGRSKSFQESAAITAVSRYKKYGRGLFQRRRSKRSPKNAVGVGGKSNYSLDRL 632
            ..||....:| |...:.:....||:         |..:..|||| .|.:.|:.|....| ||:.:
  Fly   378 RLPALAPIISTPCSSADADDAGAAM---------GLPVRARRRS-ISRQEAIFVEPTGN-SLENV 431

  Fly   633 SQNIEITIQDEDGNFHPYDDNYHMLAGRLDATDVDDDVGFDDLYLDDRPSGASDDVAFAGDISDG 697
            |              |...||.:..:. :|..|..|:                     |..::..
  Fly   432 S--------------HEEVDNSNTKSS-VDTADSLDE---------------------ASTMATC 460

  Fly   698 GASSRSRASDASDGHVLGRLLRQVRQGLSVGWRKPRYQKRRARSISEEFS-------------SG 749
            |:...:..|.||..|....::|.:.  |.|    |..::.||.|:...||             |.
  Fly   461 GSPGAAGGSGASSSHHNAFVVRDIY--LMV----PDLKRDRAASVDSCFSKLSSNAKTEELQPSA 519

  Fly   750 D-----TPRFK-------------DEESASKAESGHGPSSGGAGGGGGSGGAGGSSAAGASASAA 796
            |     .|...             ||::..||.|              ..|:..:.|.|.:|||:
  Fly   520 DGCFLTVPNINATRSRSVDIVLPTDEQARYKALS--------------MTGSTVTYADGRTASAS 570

  Fly   797 GG---------------SSGHY-RPDSGSGHKSDKSEKDREKKEKEREEKDIEMIKVFDGNNSFR 845
            ..               ...|| :|.|.||.....:|               |.||        .
  Fly   571 NSRRPIRIVPDWTENAVQGEHYWKPTSASGDLCCLNE---------------ECIK--------S 612

  Fly   846 RQQYRVIIVQRTYTLEQLLTTALRAFHITRDPQAFYLTDLYAPAGMEDTPMLDPTPVLNLVHLEG 910
            .|:.:....|            |.|.|                               |.:....
  Fly   613 GQRMKCSACQ------------LVAHH-------------------------------NCIPFVN 634

  Fly   911 KRPAIYLRFHDRDRG---------------HVRVYPGKL-QCSMLEDPYVSVPVDNSTVIKDLIR 959
            ::..:..:...||.|               |.::..||. ||...      .|      :|..::
  Fly   635 EKSTLACKPTYRDVGIRQYREQTTTHHHWVHRKLEKGKCKQCGKF------FP------MKQAVQ 687

  Fly   960 DALDKFGLQD---------NQIQDYRCSEVLLDRG-VTERILSWNERP------WDI---MKQLG 1005
            ..|  ||.::         ::|  |...|...::. :.|.....|..|      |.:   .|...
  Fly   688 SKL--FGSKEIVALACAWCHEI--YHNKEACFNQAKIGEECRLGNYAPIIVPPSWIVKLPTKGNF 748

  Fly  1006 KDSIRQMELMRFYMQHKQDPHGPNIALFVGNLPTGLSQRNYEQILNKYVTDENKFISIGPIYYEY 1070
            |.|||        :.:|.:....:.....|....|...::.:|...:....|.|           
  Fly   749 KSSIR--------VSNKNNAASGSGGGGAGGGAGGGGGKSKKQTQRRQKGKEEK----------- 794

  Fly  1071 GSVVLTFEDSMKAVRAFYNLRETIIEDKKLLVLLLPNIEPSMVPS-DVRPLLVFVNVKSGGCQGL 1134
                       |..|||.                   ::|  :|| :|.|::||:|.||||.||.
  Fly   795 -----------KEPRAFI-------------------VKP--IPSPEVIPVIVFINPKSGGNQGH 827

  Fly  1135 ELISSFRKLLNPYQVFDLDNGGPLPGYVQPITVFVIRPLIFDSIISLYVFRQITNYKILVCGGDG 1199
            :|:..|:.||||.|||||..|||..|                    |.:||:..|.::|.|||||
  Fly   828 KLLGKFQHLLNPRQVFDLTQGGPKMG--------------------LDMFRKAPNLRVLACGGDG 872

  Fly  1200 TIGWVLQCLDNVGQDSECSSPPCAIVPLGTGNDLARVLCWG-----SGYTGGEDPL-NLLRDVIE 1258
            |:||||..||.: |.....:|...::||||||||||.|.||     .|||  ::|: .:||::..
  Fly   873 TVGWVLSVLDQI-QPPLQPAPAVGVLPLGTGNDLARALGWGGSIFFQGYT--DEPIGKILREIGM 934

  Fly  1259 AEEIRLDRWTVVFHPEDKPEEPAMKAPSQTTGGAQNEDNSQIFVMNNYFGIGIDADLCLDFHNAR 1323
            ::.:.:|||.|...|.|...:..:.         :::.|..:.|:||||..|:||.:.|:||.||
  Fly   935 SQCVLMDRWRVKVTPNDDVTDDHVD---------RSKPNVPLNVINNYFSFGVDAHIALEFHEAR 990

  Fly  1324 EENPNQFNSRLRNKGYYVKMGLRKIVGRKAVKDLQKELRLEVDGKIVELPPVD----GIIILNIL 1384
            |.:|.:||||||||.||.:||.:.::.|: .::|.:.:.||.||:.......|    .::.|||.
  Fly   991 EAHPERFNSRLRNKMYYGQMGGKDLILRQ-YRNLSQWVTLECDGQDFTGKLRDAGCHAVLFLNIP 1054

  Fly  1385 SWGSGANPWGPDKDDQF--STPNHYDGMLEVVGVTGVVHLGQIQSGIRTAMRIAQGGHIKIHLNT 1447
            |:|.|.:||    :|.|  |.|:..||::||||:| ...|..:|:|:.... |.|....:|....
  Fly  1055 SYGGGTHPW----NDSFGASKPSIDDGLMEVVGLT-TYQLPMLQAGMHGTC-ICQCRKARIITKR 1113

  Fly  1448 DMPVQVDGEPWIQSPGDVVVLKSALKATMLKKTKSKRRLTEPHISPAVLSLSVAQQGSGSGSMSV 1512
            .:|:|||||.....| .|:.::...||.||.|.|                       .|.|.:.|
  Fly  1114 TIPMQVDGEACRVKP-SVIEIELLNKALMLSKRK-----------------------HGRGDVQV 1154

  Fly  1513 SGSPQSQSQQQLQQQQQQQQQQ 1534
              :|..:.|..:.:...||.:|
  Fly  1155 --NPLEKMQLHILRVTMQQYEQ 1174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31140NP_001262893.1 C1 6..55 CDD:237996
C1 69..116 CDD:197519
C1_1 135..185 CDD:278556
RA 833..922 CDD:279168 9/88 (10%)
UBQ 923..1022 CDD:294102 24/133 (18%)
RRM_SF 1032..1102 CDD:302621 9/69 (13%)
DAGKc 1121..1266 CDD:214487 62/150 (41%)
DAGK_acc 1302..1457 CDD:279003 64/160 (40%)
rdgANP_001259366.1 C1_1 591..640 CDD:278556 16/114 (14%)
C1_1 661..725 CDD:278556 14/79 (18%)
LCB5 813..1140 CDD:224513 137/366 (37%)
DAGKc 814..942 CDD:214487 62/150 (41%)
DAGKa 969..1123 CDD:214486 64/160 (40%)
ANK 1329..1447 CDD:238125
ANK repeat 1329..1356 CDD:293786
Ank_2 1330..1425 CDD:289560
ANK repeat 1358..1391 CDD:293786
ANK repeat 1393..1425 CDD:293786
Ank_2 1399..>1459 CDD:289560
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462332
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D17792at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11255
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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