DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-1sigma and AP1S2

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001259000.1 Gene:AP1S2 / 8905 HGNCID:560 Length:160 Species:Homo sapiens


Alignment Length:159 Identity:130/159 - (81%)
Similarity:139/159 - (87%) Gaps:4/159 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLY 66
            |.|||||||||||||||||:...||.|||||||||.|:|||||||||||||:|.|||||||||||
Human     1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLY 65

  Fly    67 FCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKNV 131
            ||||||..||||:|||||||||||||||||||||||||||||||||||||.|:|||:||||||||
Human    66 FCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNV 130

  Fly   132 LKAIASQDLLQED----ETPQSFFDDHGL 156
            ||||...||||||    |||:|..::.||
Human   131 LKAIEQADLLQEDAKEAETPRSVLEEIGL 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 123/144 (85%)
AP1S2NP_001259000.1 AP1_sigma 2..144 CDD:341435 122/141 (87%)

Return to query results.
Submit another query.