DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and AP19

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_565415.1 Gene:AP19 / 816245 AraportID:AT2G17380 Length:161 Species:Arabidopsis thaliana


Alignment Length:143 Identity:92/143 - (64%)
Similarity:113/143 - (79%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASL 65
            |:.|:||.|||||:||.|||..|..|.:.|:.|||...||.|.||:|:|:||:..|:||||||||
plant     1 MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKRYASL 65

  Fly    66 YFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKN 130
            |||..|::.||||..|||||.|||:||:|||||||||:||||.|||:|||||||.||:||:|||.
plant    66 YFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKT 130

  Fly   131 VLKAIASQDLLQE 143
            |.:.|::||.|.|
plant   131 VARIISAQDQLVE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 91/140 (65%)
AP19NP_565415.1 AP1_sigma 3..143 CDD:341435 90/139 (65%)

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