DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and ap1s3a

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_009290225.1 Gene:ap1s3a / 550415 ZFINID:ZDB-GENE-050417-222 Length:163 Species:Danio rerio


Alignment Length:142 Identity:99/142 - (69%)
Similarity:120/142 - (84%) Gaps:0/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLY 66
            |.|:||||||||||||||:....|:.|:||.|:|...:|:|.||.|:||.|:|.||||:||||||
Zfish    11 MRFLLLFSRQGKLRLQKWFTVLSDRDKRKIIRDLTQMVLSRPPKACNFLPWRDLKIVYRRYASLY 75

  Fly    67 FCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKNV 131
            |||.:||:|||||||:|:||||||||:|||:|||||||||||||||||||.:||||:|||||.:|
Zfish    76 FCCGLEQDDNELLTLDILHRYVELLDQYFGNVCELDIIFNFEKAYFILDEFVIGGEVQETSKASV 140

  Fly   132 LKAIASQDLLQE 143
            .|:|...:.|||
Zfish   141 AKSIEEAESLQE 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 98/140 (70%)
ap1s3aXP_009290225.1 AP1_sigma 12..152 CDD:341435 96/139 (69%)

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