DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and ap1s3

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001016579.1 Gene:ap1s3 / 549333 XenbaseID:XB-GENE-973129 Length:154 Species:Xenopus tropicalis


Alignment Length:143 Identity:106/143 - (74%)
Similarity:124/143 - (86%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASL 65
            |:.|:|||||||||||||||:..|||.|.||:||||..||:|.|||.||::|||.|:||||||||
 Frog     1 MIRFLLLFSRQGKLRLQKWYVTLPDKEKHKISRELVHIILSRNPKMSSFVDWKDLKLVYKRYASL 65

  Fly    66 YFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKN 130
            |||||||..|||||.||::||:|||||||||:|||||||||||||||:|||.|:|||||||||.:
 Frog    66 YFCCAIEDQDNELLALELVHRFVELLDKYFGNVCELDIIFNFEKAYFLLDEFLMGGEIQETSKDS 130

  Fly   131 VLKAIASQDLLQE 143
            |::|....|:|||
 Frog   131 VVRATEDSDMLQE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 105/140 (75%)
ap1s3NP_001016579.1 AP1_sigma 3..143 CDD:341435 103/139 (74%)

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