DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and ap1s3b

DIOPT Version :9

Sequence 1:NP_001247273.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001004635.1 Gene:ap1s3b / 447897 ZFINID:ZDB-GENE-040912-62 Length:154 Species:Danio rerio


Alignment Length:143 Identity:102/143 - (71%)
Similarity:125/143 - (87%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASL 65
            ||.|:||||||||||||||::..|::.:|||.:::.|.:|||||:.|:|:.|||.||||||||||
Zfish     1 MMHFLLLFSRQGKLRLQKWFLPLPERDRKKIVKDMTTMVLARKPRTCNFMHWKDLKIVYKRYASL 65

  Fly    66 YFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKN 130
            ||||.:|..|||||.|||:||||||||||||:|||||||||||||||||||.|:|||||||||::
Zfish    66 YFCCGLENQDNELLALEILHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFLMGGEIQETSKQS 130

  Fly   131 VLKAIASQDLLQE 143
            :.|:|.:.|:|||
Zfish   131 IAKSIEASDMLQE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_001247273.1 AP1_sigma 4..145 CDD:341435 100/140 (71%)
ap1s3bNP_001004635.1 Clat_adaptor_s 1..142 CDD:250451 99/140 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594700
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 1 1.010 - - D1307450at2759
OrthoFinder 1 1.000 - - FOG0000441
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100926
Panther 1 1.100 - - O PTHR11753
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X298
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.720

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