DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and or

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster


Alignment Length:151 Identity:51/151 - (33%)
Similarity:94/151 - (62%) Gaps:6/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLE------WKDCKIVY 59
            |:..:|:|:..||.||.|:|..:.:.::::|.:|....:..|...:|:|||      ..|.|::|
  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65

  Fly    60 KRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQ 124
            :.||:|||...::.:::||..|::|..:||.|||.|.:|||||:||:.:..:.||.||::||.:.
  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130

  Fly   125 ETSKKNVLKAIASQDLLQEDE 145
            :|:..:::..|..|:.:.:.|
  Fly   131 QTNMNDIMARIEEQNKIVKQE 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 49/146 (34%)
orNP_536793.1 AP3_sigma 1..146 CDD:341438 50/144 (35%)

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