DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and zgc:162858

DIOPT Version :9

Sequence 1:NP_001247273.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001082809.1 Gene:zgc:162858 / 337771 ZFINID:ZDB-GENE-030131-7909 Length:181 Species:Danio rerio


Alignment Length:144 Identity:122/144 - (84%)
Similarity:128/144 - (88%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLY 66
            |.|||||||||||||||||:...||.|||||||||.|:|||||||||||||:|.|||||||||||
Zfish    25 MQFMLLFSRQGKLRLQKWYVPLCDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLY 89

  Fly    67 FCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKNV 131
            ||||||..||||:||||||||||||||||||||.||||||||||||||||.|:|||.||||||||
Zfish    90 FCCAIEDQDNELITLEIIHRYVELLDKYFGSVCGLDIIFNFEKAYFILDEFLLGGEAQETSKKNV 154

  Fly   132 LKAIASQDLLQEDE 145
            ||||...|||||.:
Zfish   155 LKAIEQADLLQESQ 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_001247273.1 AP1_sigma 4..145 CDD:341435 121/140 (86%)
zgc:162858NP_001082809.1 Clat_adaptor_s 25..165 CDD:250451 119/139 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1307450at2759
OrthoFinder 1 1.000 - - FOG0000441
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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