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Protein Alignment AP-1sigma and Ap3s1
DIOPT Version :9
Sequence 1: | NP_001247273.1 |
Gene: | AP-1sigma / 42835 |
FlyBaseID: | FBgn0039132 |
Length: | 157 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006254755.1 |
Gene: | Ap3s1 / 302290 |
RGDID: | 1311115 |
Length: | 209 |
Species: | Rattus norvegicus |
Alignment Length: | 153 |
Identity: | 55/153 - (35%) |
Similarity: | 96/153 - (62%) |
Gaps: | 6/153 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLE------WKDCKIVY 59
|:..:|:|:..||.||.|:|..|.:..:::|.||....:..|...:|:||| ..|.|::|
Rat 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIY 65
Fly 60 KRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQ 124
:.||:|||...::.:::||..|::|..:||.|||.|.:|||||:||:.:|.:.||.|:::||.:.
Rat 66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVL 130
Fly 125 ETSKKNVLKAIASQDLLQEDEAV 147
||:...::..|.:|:.|::.|.:
Rat 131 ETNMNEIVTQIDAQNKLEKSEQI 153
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5030 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53551 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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