DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and aps2

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_596138.1 Gene:aps2 / 2541086 PomBaseID:SPBC685.04C Length:143 Species:Schizosaccharomyces pombe


Alignment Length:143 Identity:67/143 - (46%)
Similarity:101/143 - (70%) Gaps:1/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPK-MCSFLEWKDCKIVYKRYAS 64
            |:.|:|:.:|.||.||.|:|:.:.|..|.::...:...|..|..| ..:||||::.|:||:|||.
pombe     1 MIQFILIQNRHGKNRLSKYYVPFDDDEKVRLKARIHQLISQRNQKFQANFLEWENSKLVYRRYAG 65

  Fly    65 LYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKK 129
            ||||..::..||:|..||:||.:||:||.:||:|||||:||||.|...||||:::||||.|::||
pombe    66 LYFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGESNKK 130

  Fly   130 NVLKAIASQDLLQ 142
            :||:.|.:.:.|:
pombe   131 SVLERIEALEKLE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 66/140 (47%)
aps2NP_596138.1 AP2_sigma 1..142 CDD:341437 66/140 (47%)

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