DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1sigma and aps-2

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_508767.1 Gene:aps-2 / 184091 WormBaseID:WBGene00000157 Length:142 Species:Caenorhabditis elegans


Alignment Length:135 Identity:64/135 - (47%)
Similarity:95/135 - (70%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASL 65
            |:.|:|:.:|.||.||.||||.:.|..|:|:..|:...:..|..|..:|:|:::.||||:|||.|
 Worm     1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGL 65

  Fly    66 YFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKN 130
            |||..::..||.|..||.||.:||:|::||.:|||||::|||.|.|.::||:.:.|||:|||:..
 Worm    66 YFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTK 130

  Fly   131 VLKAI 135
            |||.:
 Worm   131 VLKQL 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 63/132 (48%)
aps-2NP_508767.1 AP2_sigma 1..141 CDD:341437 64/135 (47%)

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