DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-1sigma and AP-2sigma

DIOPT Version :10

Sequence 1:NP_651198.1 Gene:AP-1sigma / 42835 FlyBaseID:FBgn0039132 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_321389.2 Gene:AP-2sigma / 1281473 VectorBaseID:AGAMI1_014070 Length:142 Species:Anopheles gambiae


Alignment Length:142 Identity:66/142 - (46%)
Similarity:100/142 - (70%) Gaps:0/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASL 65
            |:.|:|:.:|.||.||.||||.:.|..|:|:..|:...:..|..|..:|:|:::.||||:|||.|
Mosquito     1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGL 65

  Fly    66 YFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQETSKKN 130
            |||..::.|||.|..||.||.:||:|::||.:|||||::|||.|.|.::||:.:.|||:|||:..
Mosquito    66 YFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTK 130

  Fly   131 VLKAIASQDLLQ 142
            |||.:.:.:.|:
Mosquito   131 VLKQLLTLNSLE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1sigmaNP_651198.1 AP1_sigma 4..145 CDD:341435 65/139 (47%)
AP-2sigmaXP_321389.2 AP2_sigma 1..141 CDD:341437 65/139 (47%)

Return to query results.
Submit another query.