DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluProRS and AIM10

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_011010.1 Gene:AIM10 / 856820 SGDID:S000000889 Length:576 Species:Saccharomyces cerevisiae


Alignment Length:543 Identity:87/543 - (16%)
Similarity:156/543 - (28%) Gaps:242/543 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly  1254 SFAIWKAIKTWFDAEITRM----GVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDLA 1314
            |.|:|:|...|.::|:.::    |.:.|                           :|.:.:.|:.
Yeast    84 SKALWQATDRWNNSELFKLKDSKGKQYC---------------------------LTATCEEDIT 121

  Fly  1315 EPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAFAD 1379
            :              ....::.||:|:||.:.|.....|.|.:.....||.||||.::.::..::
Yeast   122 D--------------LMKNYIASYKDMPITIYQMTRKYRDEIRPRGGILRGREFLMKDAYSFASN 172

  Fly  1380 KEEAAKEVLDILDLYALVYTHLLAIPVVK--------GRKTEKE---------------KFAG-- 1419
            :|:|......:.|.|..::.. |.||.|.        |.:..||               |..|  
Yeast   173 EEDAFASFQKLDDTYNKIFKD-LKIPFVSAWADSGDIGGEFSKEFHLIHESGEDTLMSCKHCGDI 236

  Fly  1420 -------------GDYTTTVE-------------------------------------------- 1427
                         |.|:..|:                                            
Yeast   237 STLDMSQSYPEKDGQYSGDVDCKYALTKDHSTLICFYYPKDRQLNWNLALNAMDKDIDLTLRNKP 301

  Fly  1428 -----------------------------------------------------AFISASGRAIQG 1439
                                                                 :.:.|....|.|
Yeast   302 NDHVLQVYEKDNEDIMFSKILRVMDCRLNSKSNFPDFPLKKYLKNNFGQISDVSIVDAQENEICG 366

  Fly  1440 ATSH------------H---LGQNFSKMFEIVYEDPETQQKKYVYQNSWGI-TTRTIGVMIMVHA 1488
            ....            |   ||..:||...:.:.|.|.:.:.:|:...:|| .:|.:|.:..:..
Yeast   367 KCEEGRLEPLKSIEVGHIFLLGNKYSKPLNVKFVDKENKNETFVHMGCYGIGVSRLVGAIAELGR 431

  Fly  1489 DNQGLVLPPHVACIQAIVVPCGITVNT--KDDERAQLLDACKALEKRLVGGGV--RCEGDYRDNY 1549
            |:.|...|       ||:.|..:::.|  .:.|.:|.|...|:   .|:....  ..:.|..|.:
Yeast   432 DSNGFRWP-------AIMAPYKVSICTGPNNPENSQRLQDVKS---ELLNDPTMQNLQNDILDQF 486

  Fly  1550 SP----GWKFNHWELKGVPL------------RLEV-----GPKDLKAQQL----------VAVR 1583
            :.    |.:.......|:||            .:||     |.|||..:|.          ....
Yeast   487 NEKLGIGARIKLSHAMGIPLCVIVGSKSWPNVEIEVRGIRWGEKDLWRKQFEKRCSELQWKCTKN 551

  Fly  1584 RDTVEKITIPLADVEKKIPALLE 1606
            ...:||.|:|:..:.:.|..||:
Yeast   552 EHGIEKHTVPIQHLAEVIGVLLK 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327 87/543 (16%)
ProRS_core_arch_euk 1224..1486 CDD:238401 55/386 (14%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 31/150 (21%)
AIM10NP_011010.1 ProS 9..530 CDD:223519 76/497 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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