DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluProRS and MSE1

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_014609.1 Gene:MSE1 / 854124 SGDID:S000005393 Length:536 Species:Saccharomyces cerevisiae


Alignment Length:400 Identity:91/400 - (22%)
Similarity:146/400 - (36%) Gaps:102/400 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 VVVRFPPEASGYLHIGHAKAALLNQYYALAFQGTLIMRFDDTNPAKETVEFENVILGDLEQLQIK 268
            |..||.|..:|:||:|..:.||.|...|....|..::|.:||:..:.....|..|...|:...|.
Yeast    45 VRTRFAPSPTGFLHLGSLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNIN 109

  Fly   269 PDVFTHTSNYFDLMLDYCVR-LIKESKAY--------VDDTPPEQMKLEREQRVESANRSNSVEK 324
            .|......:...|:.|..|: |:...|||        ::|.....|:| :...:.|.:|..:   
Yeast   110 YDETPIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMEL-KPPSMASYDRCCA--- 170

  Fly   325 NLSLWEEMVKGS-EKGQKYCVRAKIDMSSPNGCMRDPT---IYRCKNEPHPRTGTKYKVY----- 380
              .|.||.:|.. .:|..:.||.|    ||.   |.||   :...:....|:.....|.|     
Yeast   171 --HLGEEEIKSKLAQGIPFTVRFK----SPE---RYPTFTDLLHGQINLQPQVNFNDKRYDDLIL 226

  Fly   381 ------PTYDFACPIVDAIENVTHTLRTTEYHDRDDQFYWFIDALK---LRKPYIWS---YSRLN 433
                  |||..|..:.|.:..:||.:|..|         |.....|   |...:.|:   :..:.
Yeast   227 VKSDKLPTYHLANVVDDHLMGITHVIRGEE---------WLPSTPKHIALYNAFGWACPKFIHIP 282

  Fly   434 MTNTV----LSKRKLTWFVDSGLVD------------------GWDDPRFPTVRGIIRRGMTVEG 476
            :..||    |||||    .|..:.|                  ||..||  .:........::|.
Yeast   283 LLTTVGDKKLSKRK----GDMSISDLKRQGVLPEALINFCALFGWSPPR--DLASKKHECFSMEE 341

  Fly   477 LKEFIIAQGSSKSVVFMNWDKIWAFNK--------------KVIDPIAPRYTAL--------EKE 519
            |:......|.:|....::..|:|.|||              :::|.|.|...::        ||.
Yeast   342 LETIFNLNGLTKGNAKVDDKKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKV 406

  Fly   520 KRVIVNVAGA 529
            .::::|..|:
Yeast   407 AKILLNCGGS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492 91/399 (23%)
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135 84/369 (23%)
tRNA-synt_1c_C 510..688 CDD:281883 5/27 (19%)
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327
ProRS_core_arch_euk 1224..1486 CDD:238401
ProRS_anticodon_zinc 1492..1714 CDD:238439
MSE1NP_014609.1 gltX_bact 44..533 CDD:273092 91/399 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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