DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluProRS and OVA6

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_200065.1 Gene:OVA6 / 835328 AraportID:AT5G52520 Length:543 Species:Arabidopsis thaliana


Alignment Length:542 Identity:193/542 - (35%)
Similarity:298/542 - (54%) Gaps:52/542 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1192 KPAKPVKKEPAADASGAVKKQ--TRLGLE---ATKEDNLPDWYSQVITKGEMIEYYDVSGCYILR 1251
            :|.......|:..||...|..  .||..:   ..:..:...||..||...|:.:|..|.|..::|
plant    35 RPLSGFATAPSGTASPETKSSEVDRLRSDRAVTPRSQDFNAWYLDVIASAELADYGPVRGTMVIR 99

  Fly  1252 QWSFAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDLAEP 1316
            .:.:|||:||:.:.:.:....|....|||.|:..:.:|||.:|:..|:||:|.||..|..:|.|.
plant   100 PYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTVGGGKELEEK 164

  Fly  1317 IAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAFADKE 1381
            :.|||||||::...:.:|:.||||||:.:|||.||.|||.: ..||:||.||||||||||.|..|
plant   165 LVVRPTSETIVNHMFTQWIHSYRDLPLMINQWANVTRWEMR-TKPFIRTLEFLWQEGHTAHATPE 228

  Fly  1382 EAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGRAIQGATSHHLG 1446
            ||.||...::::|........||||:.|||::.|.|||.|.|.|:||.: ...:|:|..|||:||
plant   229 EAEKEAKQMIEIYTRFAFEQTAIPVIPGRKSKLETFAGADITYTIEAMM-GDRKALQAGTSHNLG 292

  Fly  1447 QNFSKMFEIVYEDPETQQKKYVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGI 1511
            ||||:.|...:.| |..::::|:|.||.::||.:|.:||.|.|:.||:|||.:|.||.::||   
plant   293 QNFSRAFGTQFAD-ENGERQHVWQTSWAVSTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVP--- 353

  Fly  1512 TVNTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKA 1576
             :..||.|:..:|.|..::::.|...|||.:.|..|..:||||||.||:||:|||:|:||:|:.:
plant   354 -IWKKDTEKTGVLSAASSVKEALQTAGVRVKLDDTDQRTPGWKFNFWEMKGIPLRIEIGPRDVSS 417

  Fly  1577 QQLVAVRRD-----------TVEKITIPLADVEKKIPALLETIHESMLNKAQEDMTSHTKKVTNW 1630
            ..:|..|||           ::|..|: :|.|::|    |:.|..|:|.||.....|:...|.::
plant   418 NSVVVSRRDVPGKAGKVFGISMEPSTL-VAYVKEK----LDEIQTSLLEKALSFRDSNIVDVNSY 477

  Fly  1631 TDFCGFLEQKNILLAPFCGEISCEDKIKADSARGEEAEPGAPAMGAKSLCIPFDQPAPIAASDKC 1695
            .:....:........|:....:.|.::|.::             ||...|.||:|   ...:..|
plant   478 AELKDAISSGKWARGPWSASDADEQRVKEET-------------GATIRCFPFEQ---TQGTKTC 526

  Fly  1696 I---NPSCTNKPKFYTLFGRSY 1714
            :   ||:     :...:|.:||
plant   527 LMTGNPA-----EEVAIFAKSY 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327 184/507 (36%)
ProRS_core_arch_euk 1224..1486 CDD:238401 113/261 (43%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 68/235 (29%)
OVA6NP_200065.1 PRK08661 64..543 CDD:236327 184/511 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100749
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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