DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluProRS and AT5G10880

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_196649.1 Gene:AT5G10880 / 830955 AraportID:AT5G10880 Length:309 Species:Arabidopsis thaliana


Alignment Length:506 Identity:126/506 - (24%)
Similarity:187/506 - (36%) Gaps:201/506 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1211 KQTRLGLEATKEDNLPDWYSQVITKGEMIEYYD-VSGCYILRQWSFAIWKAIKTWFDAEITRMGV 1274
            |:||||:.|.|:::...|||:....||::|||: |.|||||:                       
plant     3 KETRLGITAKKDEDFGKWYSEACRFGELVEYYESVKGCYILK----------------------- 44

  Fly  1275 KECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDLAEPIAVRPTSETVMYPAYAKWVQSYR 1339
                 |..:|...||:                                                 
plant    45 -----PSGISDEYLER------------------------------------------------- 55

  Fly  1340 DLPIRLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAFADKEEAAKEVLDILDLYALVYTHLLAI 1404
                                                                             
plant    56 ----------------------------------------------------------------- 55

  Fly  1405 PVVKGRKTEKEKFAGGDYTTTVEAFISASGRAIQGATSHHLGQNFSKMFEIVYEDPETQQKKYVY 1469
                             ||.|          .::|.....||     :.|:|  |..||...:  
plant    56 -----------------YTNT----------TLKGLLQRLLG-----LQELV--DKRTQGPPF-- 84

  Fly  1470 QNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKRL 1534
                       ....|.|.|::|||.||.||.:|.:|:  .:.:....|.: :|.|||:|:|..|
plant    85 -----------EAACMTHGDDKGLVFPPKVAPVQVVVI--HVPIKGAADYQ-ELCDACEAVESTL 135

  Fly  1535 VGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVRRDTVEKITIPLADVEK 1599
            :|.|:|.|.|.|||||.|||:...||.|||||:|.||:||...|:..|.||...|:.:...|:.:
plant   136 LGAGIRAEADIRDNYSCGWKYADQELTGVPLRIETGPRDLANDQVRIVTRDNGAKMDVKRGDLIE 200

  Fly  1600 KIPALLETIHESMLNKAQEDMTSHTKKVTNWTDFCGFLEQKNILLAPFCGEISCEDKIKADSARG 1664
            ::..|||.|..::.:.|:..:...|:||..|.:|...|.||.::|||:|.::..|..:|. ..||
plant   201 QVKDLLEKIQSNLYDVAKRKVEECTQKVETWDEFVEALSQKKLILAPWCDKVEVEKDVKR-RTRG 264

  Fly  1665 EEAEPGAPAMGAKSLCIPFDQPAPIAASDKCINPSCTNKP-KFYTLFGRSY 1714
            :|.  |....|||:||.|.:|| .:.....|.   .:.|| |.::.:||||
plant   265 DET--GGGGGGAKTLCTPLEQP-ELGEETLCF---ASGKPAKKWSYWGRSY 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327 118/495 (24%)
ProRS_core_arch_euk 1224..1486 CDD:238401 29/262 (11%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 85/222 (38%)
AT5G10880NP_196649.1 class_II_aaRS-like_core 16..>47 CDD:294192 15/58 (26%)
ProRS_anticodon_zinc 96..309 CDD:238439 85/222 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 92 1.000 Domainoid score I2592
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002386
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43382
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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