DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluProRS and AT3G62120

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_191771.1 Gene:AT3G62120 / 825385 AraportID:AT3G62120 Length:530 Species:Arabidopsis thaliana


Alignment Length:540 Identity:293/540 - (54%)
Similarity:371/540 - (68%) Gaps:26/540 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1183 KKAPKEAQPKPAK-PVKKEPAADASGA------VKKQTRLGLEATKEDNLPDWYSQVITKGEMIE 1240
            :|..||.:.|..| .|.||..|.||.:      |||:|.|||...|::|..:|||:| .|.:|||
plant     9 EKVVKEKKEKVKKEKVVKEKVAKASSSGQKKKDVKKETGLGLSVKKDENFGEWYSEV-CKQDMIE 72

  Fly  1241 YYDVSGCYILRQWSFAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWV 1305
            |||:|||||||.||.|||:.::.:|||||.:|.||.||||:|||..||||||.||..||||||||
plant    73 YYDISGCYILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEVAWV 137

  Fly  1306 TKSGDSDLAEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREFLW 1370
            ||||.|||..|||:||||||||||.|:||::.:||||::||||.|||||||..||||:|:|||||
plant   138 TKSGKSDLEVPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLW 202

  Fly  1371 QEGHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGR 1435
            ||||||||.|.||.:|||.||:||..:|...||:|||||.|:|.||||||.|||:|||||..:||
plant   203 QEGHTAFATKAEADEEVLQILELYRRIYEEYLAVPVVKGMKSENEKFAGGLYTTSVEAFIPNTGR 267

  Fly  1436 AIQGATSHHLGQNFSKMFEIVYEDPETQQKKYVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVA 1500
            .:||||||.|||||:|||||.:|: |..:.:.|:||||..:|||||||||.|.|::||||||.||
plant   268 GVQGATSHCLGQNFAKMFEINFEN-EKAETEMVWQNSWAYSTRTIGVMIMTHGDDKGLVLPPKVA 331

  Fly  1501 CIQAIVVPCGITVNTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPL 1565
            .:|.:|:|    |..||.....:.|||.|....|...|:|.|.|.|||||||||::.||:|||||
plant   332 SVQVVVIP----VPYKDANTQGIYDACTATASALCEAGIRAEEDLRDNYSPGWKYSDWEMKGVPL 392

  Fly  1566 RLEVGPKDLKAQQLVAVRRDTVEKITIPLADVEKKIPALLETIHESMLNKAQEDMTSHTKKVTNW 1630
            |:|:||:||:..|:..||||...|..||...:.:.:..|||.|.::|...|::...:..::|..|
plant   393 RIEIGPRDLENDQVRTVRRDNGVKEDIPRGSLVEHVKELLEKIQQNMYEVAKQKREACVQEVKTW 457

  Fly  1631 TDFCGFLEQKNILLAPFCGEISCEDKIKADSARGEEAEPGAPAMGAKSLCIPFDQPAPIAASDKC 1695
            .:|...|.:|.::|||:|.|...|..:||.:    :.|.||    ||:||.||||| .:.....|
plant   458 DEFIKALNEKKLILAPWCDEEEVERDVKART----KGETGA----AKTLCSPFDQP-ELPEGTLC 513

  Fly  1696 INPSCTNKP-KFYTLFGRSY 1714
            .   .:.|| |.:|.:||||
plant   514 F---ASGKPAKKWTYWGRSY 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327 273/494 (55%)
ProRS_core_arch_euk 1224..1486 CDD:238401 178/261 (68%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 91/222 (41%)
AT3G62120NP_191771.1 PRK08661 52..530 CDD:236327 273/495 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 243 1.000 Domainoid score I572
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002386
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100749
Panther 1 1.100 - - LDO PTHR43382
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1809
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.810

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