DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluProRS and wars1

DIOPT Version :10

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_012824021.1 Gene:wars1 / 734080 XenbaseID:XB-GENE-954237 Length:517 Species:Xenopus tropicalis


Alignment Length:138 Identity:50/138 - (36%)
Similarity:71/138 - (51%) Gaps:22/138 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   741 SSGQASELD--SQISQQGDLVRDLKSKKAAKDQIDVAVKKLLALKADYKSATGKDWKPGQTSASS 803
            :||....:|  :.::.|||.||.|||:||.|::||||||.|||||.|||:.||:|:|||...|.:
 Frog    50 TSGSLKPMDLYNSLTAQGDKVRALKSEKAPKEEIDVAVKLLLALKVDYKNVTGQDYKPGVPPADN 114

  Fly   804 APVPAASSSSANDAVSVNASIVKQGDLVRDLKGKKASKPEID--------AAVKTLLELKAQYKT 860
            .|..:...|:.:|          ..|.|.....:..|...:|        .:.|...||..:.:.
 Frog   115 LPNNSNQPSTTDD----------DDDFVDPWTVQTGSAKGVDYDKLIVRFGSSKIDQELIDRIER 169

  Fly   861 LTGQDWKP 868
            :|||  ||
 Frog   170 VTGQ--KP 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
WEPRS_RNA 748..797 CDD:238473 30/50 (60%)
WHEP-TRS 821..870 CDD:459819 12/56 (21%)
WEPRS_RNA 894..943 CDD:238473
WEPRS_RNA 973..1022 CDD:238473
WEPRS_RNA 1048..1097 CDD:238473
WEPRS_RNA 1122..1169 CDD:238473
proS_fam_I 1219..1714 CDD:273062
wars1XP_012824021.1 WEPRS_RNA 59..108 CDD:238473 29/48 (60%)
PLN02486 132..514 CDD:178104 11/46 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.