DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluProRS and ears2

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_001008042.1 Gene:ears2 / 493404 XenbaseID:XB-GENE-970848 Length:516 Species:Xenopus tropicalis


Alignment Length:511 Identity:117/511 - (22%)
Similarity:196/511 - (38%) Gaps:134/511 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 EMGKVV-VRFPPEASGYLHIGHAKAALLNQYYALAFQGTLIMRFDDTNPAKETVEFENVILGDLE 263
            |.|:.| |||.|..:|:||:|..:.||.|..:|....|..|:|.:||:.::........|...||
 Frog    30 ESGREVRVRFAPSPTGFLHLGGLRTALYNYLFAKKHGGAFILRLEDTDRSRLVPGAAESIEDMLE 94

  Fly   264 QLQIKPDVFT---------HTSNYFDLMLDYCVRLIKESKAYVDDTPPEQMKLEREQRVESA--- 316
            ...|.||...         ..|...||.......|:....||.....|::::|.:.:.:.:.   
 Frog    95 WAGIPPDESPRHGGPCGPYEQSKRLDLYHVAAQALLDSGAAYRCFCTPQRLELLKREAMRNRQTP 159

  Fly   317 ---NR-----SNSVEKNLSLWEEMV------KGSEKGQKYCVR-AKIDMSSPNGCMRDPTIYRCK 366
               ||     ...||:.||.....|      :|::..|..... .:.|::|..|   ||.|    
 Frog   160 RYDNRCRHLTPKQVEEKLSRNSPFVIRFFLQEGAQPFQDLVYGWTQHDVASVEG---DPVI---- 217

  Fly   367 NEPHPRTGTKYKVYPTYDFACPIVDAIENVTHTLRTTEYHDRDDQFYWFIDALK---LRKPYIWS 428
                    .|...:|||..|..:.|....|:|.||..|         |.|...|   |.:...|.
 Frog   218 --------LKGDGFPTYHLANVVDDHHMCVSHVLRGAE---------WLISTAKHLLLYQALGWQ 265

  Fly   429 YSR-------LNMTNTVLSKRK----LTWFVDSG-----LVD-------GWDDPRFPTVRGIIRR 470
            ..:       ||...:.||||:    :..:|.||     |:|       |:.:.:.         
 Frog   266 PPQFAHLPLLLNKDGSKLSKRQGDIFIQHYVHSGYLSDALLDLITNCGSGFTENQM--------- 321

  Fly   471 GMTVEGL-KEFIIAQGSSKSVVFMNWDKIWAFNK----KVIDPIAPR--------------YTAL 516
            |.||:.| :::.:.:.|:.|.: ::.||:..||:    :.|:....|              |..|
 Frog   322 GRTVDTLIQQYELGKTSTHSAL-LDLDKLPEFNRIHLTRWIEGTETRVQLVGQLQVLLKDTYKDL 385

  Fly   517 EKEKRVIVNVAGAKVERIQVSVHPKDESLGKKTVLLGPRIYIDYVDAEALKE-----GENATFIN 576
            |.:::        .:|||.:.   :...|.:.|.||.|.....:|.....:|     ...|:.:.
 Frog   386 ELDEK--------HIERILLL---RKGHLCRLTDLLSPEYSYLWVRPSVTREQLQCLTSEASKVK 439

  Fly   577 WGNILIRKVNKDASG-NITSVDAALNLENKDFKKT-----LKLTWLAV---EDDPS 623
              |:::|.:.::.|| .:.:::..|..:.|..|.|     :||..:|:   |..||
 Frog   440 --NLVVRLLQENDSGFTLETLNGELRKQLKQVKDTKYSSAMKLLRVALSGQEHGPS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492 117/511 (23%)
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135 86/363 (24%)
tRNA-synt_1c_C 510..688 CDD:281883 29/142 (20%)
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327
ProRS_core_arch_euk 1224..1486 CDD:238401
ProRS_anticodon_zinc 1492..1714 CDD:238439
ears2NP_001008042.1 gltX 33..514 CDD:234953 115/508 (23%)
Glutamate binding. /evidence=ECO:0000250 38..40 1/1 (100%)
'HIGH' region 43..51 3/7 (43%)
Glutamate binding. /evidence=ECO:0000250 226..230 1/3 (33%)
'KMSKS' region 282..286 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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