DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluProRS and ProRS-m

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster


Alignment Length:342 Identity:81/342 - (23%)
Similarity:127/342 - (37%) Gaps:72/342 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1291 EKTHIADFAPEVAWVTKSG--DSDLAEPIAVRPTS--ETVMYPAYAKWVQ---------SYRDLP 1342
            :|..:....|...| .|:|  |.|::|...||..|  :.:|.|.:.:.|.         |||.||
  Fly    74 QKITLPILTPTGLW-KKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLP 137

  Fly  1343 IRLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAFADKEEAAKEVLDILDLYALV---YTHL--- 1401
            :||.|.....|.|.|.....:|.:|||.::.: :|...||.|.|.      |.||   |..|   
  Fly   138 LRLFQIGPKFRDELKTRFGLMRAKEFLMKDMY-SFDVSEETAMET------YTLVNAAYDRLFKQ 195

  Fly  1402 LAIPVVK--------GRKTEKE------------------KFAGGDYTTTVEAFI----SASGRA 1436
            |.:|.||        |.....|                  .|||........|..    |:..:.
  Fly   196 LEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKE 260

  Fly  1437 IQGATSHH---LGQNFSKMFEIVYEDPETQQKKYVYQNSWGI-TTRTIGVMIMVHADNQGL---- 1493
            ::|....|   ||..:||.....:.: .|.:.:.:....:|| .||.|...:.|.:.:..|    
  Fly   261 VRGVEVAHTFLLGDKYSKPLGATFLN-TTGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPK 324

  Fly  1494 VLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHW 1558
            :|.|:..|:      .|....:|:...|::::....|....:.|......|.|...:.|.:....
  Fly   325 LLAPYDVCL------IGPKQGSKEQPEAEVIENELLLNVGEICGHQELLHDDRKELTIGKRLLEA 383

  Fly  1559 ELKGVPLRLEVGPKDLK 1575
            :..|.||.:.||.|..:
  Fly   384 KRLGHPLTIVVGAKSAR 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327 81/342 (24%)
ProRS_core_arch_euk 1224..1486 CDD:238401 62/247 (25%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 18/88 (20%)
ProRS-mNP_647737.1 PRK09194 3..422 CDD:236405 81/342 (24%)
ProRS_core_prok 24..313 CDD:238402 62/247 (25%)
ProRS_anticodon_short 328..428 CDD:238438 16/79 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0442
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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