DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluProRS and pars2

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_991118.1 Gene:pars2 / 325494 ZFINID:ZDB-GENE-030131-4219 Length:477 Species:Danio rerio


Alignment Length:379 Identity:76/379 - (20%)
Similarity:130/379 - (34%) Gaps:89/379 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1277 CYFPIFVSKAVLEK--------------EKTHIADFAPEVAWVTKSGDSDLAEPIAVR------- 1320
            |::.:.|:...|||              :|..:........| .|||..:|......|       
Zfish    88 CFYYLPVALRSLEKLVRLIDEEMHAIGGQKVDMPALCSAELW-KKSGRWELMGKEMFRLLDRHNG 151

  Fly  1321 -----PTSETVMYPAYA-KWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAFAD 1379
                 ||.|..:...:| :...||:.||:.|.|.....|.|.|.....||.|||..::.: :|..
Zfish   152 EYCLGPTHEEAVTELFASQTTMSYKKLPLLLYQVTRKFRDEQKPKFGLLRGREFYMKDMY-SFDI 215

  Fly  1380 KEEAA-----------KEVLDILDLYAL-----------VYTHLLAIPVVKGRKTEKEKFAGG-D 1421
            .||||           :.:||.|.|..:           ..:|...:|...|.  :|....|. .
Zfish   216 NEEAALHTYNSVCQAYRRILDRLHLKWVQVQADTGNIGGTLSHEFQLPADIGE--DKLLVCGNCG 278

  Fly  1422 YTTTVEAFIS-------------ASGRAIQGATSHHLGQNFSKMFEIVYED----PETQQKKYVY 1469
            ::..:|....             ...|.|:...:.:||..:|:.|:.::.:    |...:     
Zfish   279 FSANIETMEPGQAKCSQCQTGKLTESRGIEVGHTFYLGTKYSQAFKALFVNASNVPAVAE----- 338

  Fly  1470 QNSWGI-TTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKR 1533
            ...:|: .||.:...|.|.:....:..|..:|..|..|:|     ..|..:..:.....:.|.:.
Zfish   339 MGCFGLGVTRILAASIEVMSTEDAIHWPGLIAPYQVCVLP-----PKKGSKAHEATQKAEELAQS 398

  Fly  1534 LVGGGVRCEG----DYRDNYSPGWKFNHWELKGVPLRLEVGP---KDLKAQQLV 1580
            |........|    |.|...:.|.:....::.|.|..:.||.   .||.:.::|
Zfish   399 LGNSLPNLRGEVVLDDRTQMTIGKRLKDAKILGYPFVVVVGQTALDDLASFEVV 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327 76/379 (20%)
ProRS_core_arch_euk 1224..1486 CDD:238401 56/276 (20%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 19/96 (20%)
pars2NP_991118.1 PRK09194 49..471 CDD:236405 76/379 (20%)
ProRS_core_prok 66..356 CDD:238402 56/276 (20%)
HGTP_anticodon 371..471 CDD:294191 17/87 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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