DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluProRS and Pars2

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_001014086.2 Gene:Pars2 / 313429 RGDID:1305345 Length:480 Species:Rattus norvegicus


Alignment Length:323 Identity:66/323 - (20%)
Similarity:113/323 - (34%) Gaps:92/323 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1246 GCYILRQWSF-AIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSG 1309
            |||.|..::. |:.|.::. .|.|:..:|                .:|.::...:|...| ..:|
  Rat    91 GCYHLMPYTVRAVEKLVRV-IDQEMQAIG----------------GQKINMPSLSPAELW-RATG 137

  Fly  1310 DSDL------------AEPIAVRPTSETVMYPAYAKWVQ-SYRDLPIRLNQWNNVVRWEFKQPTP 1361
            ..||            .:...:.||.|..:....|...: ||:.||:.|.|   |.|....:|.|
  Rat   138 RWDLMGRELLRLKDRHGKEYCLGPTHEEAVTALVASQKKLSYKQLPLLLYQ---VTRKFRDEPRP 199

  Fly  1362 ---FLRTREFLWQEGHTAFADKEEAAKEVLDIL-DLYALVY---------------------THL 1401
               .||.|||..::.:| |....|||:|...:: |.|..::                     :|.
  Rat   200 RFGLLRGREFYMKDMYT-FDSSSEAAQETYSLVCDAYCRLFDRLGLRWMKARADVGSIGGTMSHE 263

  Fly  1402 LAIPVVKGR-------------KTE----KEKF---AGGDYTTTVEAFISASGRAIQGATSHHLG 1446
            ..:||..|.             .||    .:|.   ..|..|.|         :.|:...:.:||
  Rat   264 FQLPVDIGEDRLVVCPSCHFSANTEIVDLSQKICPDCQGPLTET---------KGIEVGHTFYLG 319

  Fly  1447 QNFSKMFEIVYEDPETQQKKYVYQNSWGI-TTRTIGVMIMVHADNQGLVLPPHVACIQAIVVP 1508
            ..:|.:|...:.:.. .:........:|: .||.:...|.|.:....:..|..:|..|..::|
  Rat   320 TKYSSIFNAHFTNAH-GESLLAEMGCYGLGVTRILAAAIEVLSTEDCIRWPSLLAPYQVCIIP 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327 66/323 (20%)
ProRS_core_arch_euk 1224..1486 CDD:238401 61/299 (20%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 4/17 (24%)
Pars2NP_001014086.2 ProRS_core_prok 70..359 CDD:238402 61/299 (20%)
ProRS_anticodon_short 374..475 CDD:238438 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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