DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluProRS and pars-1

DIOPT Version :10

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_001370820.1 Gene:pars-1 / 176024 WormBaseID:WBGene00004189 Length:581 Species:Caenorhabditis elegans


Alignment Length:604 Identity:353/604 - (58%)
Similarity:433/604 - (71%) Gaps:34/604 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1119 KDELTQEINAQGEKVRAAKGNK-----AAKEVIDAEVAKLLALKAKYKEVTGTDFPVAGRGGGGG 1178
            |:|:|:||..||.:||..||:|     |.||.||    ||||||..||||||.::       ...
 Worm     4 KEEITKEIEEQGAEVRRVKGDKNSTEEAKKEAID----KLLALKLTYKEVTGQEY-------AAP 57

  Fly  1179 GGSAKKAPKEAQPKPAKPVKKEPAADASGAVKKQTRLGLEATKEDNLPDWYSQVITKGEMIEYYD 1243
            .....|..||.:|| .:|.::|...|.    ||||.||:...|:||..:|||:||||.|||||||
 Worm    58 NARQSKPKKEEKPK-QQPKQQEKKQDG----KKQTLLGVGTKKDDNYSEWYSEVITKAEMIEYYD 117

  Fly  1244 VSGCYILRQWSFAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKS 1308
            |||||:||.||||:|::|:.|||:.|.::|||.||||:|||.|.||:||||||||||||||||::
 Worm   118 VSGCYVLRPWSFAVWESIQEWFDSGIKKLGVKNCYFPMFVSNAALEREKTHIADFAPEVAWVTRA 182

  Fly  1309 GDSDLAEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREFLWQEG 1373
            |:|::|||||:||||||||||:|.|||||:|||||:||||.||||||||.|||||||||||||||
 Worm   183 GNSEMAEPIAIRPTSETVMYPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPTPFLRTREFLWQEG 247

  Fly  1374 HTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGRAIQ 1438
            |||||:..:|.|||..||||||.|||.|||||||||||:|||||||||:||||||:::.:||.||
 Worm   248 HTAFANPADAEKEVFQILDLYAGVYTDLLAIPVVKGRKSEKEKFAGGDFTTTVEAYVACNGRGIQ 312

  Fly  1439 GATSHHLGQNFSKMFEIVYEDPETQ-QKKYVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACI 1502
            |||||||||||||||:|.||||..: ::.:.:|||||::|||||.|:|:|.|::||||||.||.:
 Worm   313 GATSHHLGQNFSKMFDISYEDPAKEGERAFAWQNSWGLSTRTIGAMVMIHGDDKGLVLPPRVAAV 377

  Fly  1503 QAIVVPCGITVNTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRL 1567
            |.||||.|.    |.:.:..|.||...:.|.||..||:.|.|.|:||:.|||||||||||||:|.
 Worm   378 QVIVVPVGF----KTENKQSLFDAVDKVTKDLVADGVKAEHDLRENYNAGWKFNHWELKGVPIRF 438

  Fly  1568 EVGPKDLKAQQLVAVRRDTVEKITIPLADVEKKIPALLETIHESMLNKAQEDMTSHTKKVTNWTD 1632
            ||||.||...|:.||.|...||..:.|..:.|.:.:||:.||.:|.||......||.|..|...:
 Worm   439 EVGPNDLAKNQVTAVIRHNGEKKQLSLEGLSKTVKSLLDEIHTAMYNKVLAQRDSHLKSTTCIEE 503

  Fly  1633 FCGFLEQKNILLAPFCGEISCEDKIKADSAR--GEEAEPGAPAMGAKSLCIPFDQPAPIAASDKC 1695
            |...|::|.|:|:||||...||::||..|.|  ||.|:     ||||:||||.|||.....| ||
 Worm   504 FKKLLDEKCIILSPFCGRPDCEEEIKKASTREDGEGAQ-----MGAKTLCIPLDQPKQELPS-KC 562

  Fly  1696 INPSCTNKPKFYTLFGRSY 1714
            :.||||...|.:.||||||
 Worm   563 LFPSCTYNAKAFALFGRSY 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492
WEPRS_RNA 748..797 CDD:238473
WHEP-TRS 821..870 CDD:459819
WEPRS_RNA 894..943 CDD:238473
WEPRS_RNA 973..1022 CDD:238473
WEPRS_RNA 1048..1097 CDD:238473
WEPRS_RNA 1122..1169 CDD:238473 27/51 (53%)
proS_fam_I 1219..1714 CDD:273062 308/497 (62%)
pars-1NP_001370820.1 S15_NS1_EPRS_RNA-bind 14..57 CDD:469733 24/53 (45%)
proS_fam_I 93..581 CDD:273062 308/497 (62%)
Blue background indicates that the domain is not in the aligned region.

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