DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluProRS and eprs1

DIOPT Version :9

Sequence 1:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_031758973.1 Gene:eprs1 / 100145057 XenbaseID:XB-GENE-966791 Length:1708 Species:Xenopus tropicalis


Alignment Length:1756 Identity:968/1756 - (55%)
Similarity:1209/1756 - (68%) Gaps:141/1756 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSIKLKANLNNPPISGLATAHLINGTVPVEIVWSKEETSLQFPDN-RLLVCHSNNDVLRALARAA 64
            |::.|..:.::|.::.|.|...:.|.:.:.:...| :|.|:..|. .....||   ::|.|||.|
 Frog    52 MALTLTVSSSSPSLAVLWTVEHLKGQIQIHVQEGK-DTHLRVTDTISFTDVHS---IVRYLARLA 112

  Fly    65 PDYKLYGETAIERTQIDHWLSFS---LTCEDDISWALSFLDKSIAPVTYLVANKLTIADFALFN- 125
            ||..|.|....|:|::.||:.||   |..:.:.|..|..|:..::..||||.|.||:||..:|: 
 Frog   113 PDKGLSGSHLTEQTEVSHWMEFSQTKLMQKGEFSTGLQELNHCLSLRTYLVGNALTLADICVFSA 177

  Fly   126 -EMHSRYEFLAAKG-IPQHVQRWYDLITAQPLIQKVLQSLPEDAKVKRSPQ-----SSKEQTPAK 183
             |..|.::.|..|| .|.:|:|||..:                     .||     .:..:.|: 
 Frog   178 LEASSEWQALVQKGQTPVNVRRWYSFL---------------------EPQLGFWSRTNNKVPS- 220

  Fly   184 TGERKQE-GKFVDLPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQYYALAFQGTLIMRFDDTNP 247
              |:||: ||||:|||||||||:|||||||||||||||||||||||:|.:.|:|.||||||||||
 Frog   221 --EKKQDVGKFVELPGAEMGKVIVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDDTNP 283

  Fly   248 AKETVEFENVILGDLEQLQIKPDVFTHTSNYFDLMLDYCVRLIKESKAYVDDTPPEQMKLEREQR 312
            .||..:||.|||.|:..||||||.||:||::||.::.|..:||:|.||||||||.||||.|||||
 Frog   284 EKEKEDFEKVILEDVSMLQIKPDQFTYTSDHFDTIMKYAEKLIQEGKAYVDDTPAEQMKSEREQR 348

  Fly   313 VESANRSNSVEKNLSLWEEMVKGSEKGQKYCVRAKIDMSSPNGCMRDPTIYRCKNEPHPRTGTKY 377
            :||.:|||:|.||:.:||:|.||:|.||..|:||||||:|.||||||||::||||:||||||:||
 Frog   349 IESKHRSNTVAKNMEMWEDMKKGTEYGQTCCLRAKIDMNSNNGCMRDPTLFRCKNQPHPRTGSKY 413

  Fly   378 KVYPTYDFACPIVDAIENVTHTLRTTEYHDRDDQFYWFIDALKLRKPYIWSYSRLNMTNTVLSKR 442
            .:||||||||||||::|.|||.||||||||||:||||.||||.:||||||.|||||:.|||||||
 Frog   414 NIYPTYDFACPIVDSVEGVTHALRTTEYHDRDEQFYWIIDALGIRKPYIWEYSRLNLNNTVLSKR 478

  Fly   443 KLTWFVDSGLVDGWDDPRFPTVRGIIRRGMTVEGLKEFIIAQGSSKSVVFMNWDKIWAFNKKVID 507
            :|||||:.||||||||||||||||::||||||||||:||.|||||:|||.|.|||||||||||||
 Frog   479 RLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAFNKKVID 543

  Fly   508 PIAPRYTALEKEKRVIVNVAGAKVERIQVSVHPKDESLGKKTVLLGPRIYIDYVDAEALKEGENA 572
            |:||||:||.|.:.|.||:..||...::|:.|||:..:|:|.|..||::.|:..|||.|.|||..
 Frog   544 PVAPRYSALLKSQAVAVNIPDAKEGMVEVAKHPKNAEVGQKPVWYGPKVLIEGADAETLSEGETV 608

  Fly   573 TFINWGNILIRKVNKDASGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAYPPTFCVYFDNII 637
            |||||||::|.|:::|.||.|.|:||.|||||||:|||.|:|||| |...:.:.||.||.:|::|
 Frog   609 TFINWGNLIITKIHRDQSGKIQSLDAKLNLENKDYKKTTKITWLA-ETPKAPFIPTSCVNYDHLI 672

  Fly   638 SKAVLGKDEDFKQFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRGFFKVDVAYAPPSGYTNVPS 702
            :|.||||:|||||::...::.|..|||||.||..||||:||||||||:..|..|.|.|.::...:
 Frog   673 TKPVLGKEEDFKQYVNRSSKQEEVMLGDPCLKDLKKGDLIQLQRRGFYICDEPYEPISPHSCKEA 737

  Fly   703 PIVLFSIPDGHTKDVPTSGLKVNAPDAKATKKASSPVSSSGQASE-----------------LDS 750
            |.||..|||||||::||||.|..: ..:||||.:.| .|.|:|:.                 |.:
 Frog   738 PCVLIYIPDGHTKEMPTSGSKEKS-KTEATKKETQP-KSKGKAANVPVSVAPLASPEEDPVALYN 800

  Fly   751 QISQQGDLVRDLKSKKAAKDQIDVAVKKLLALKADYKSATGKDWKPGQTSASS-APVPAASSSSA 814
            ::|.|||||||||||||||.::|.|||.||:|||.||..||:::|||...|.. ||.||||||  
 Frog   801 KVSAQGDLVRDLKSKKAAKAEVDEAVKLLLSLKAQYKEVTGQEYKPGSAPAQKPAPSPAASSS-- 863

  Fly   815 NDAVSVNASIVKQGDLVRDLKGKKASKPEIDAAVKTLLELKAQYKTLTGQDWKPGTVPTTAAPSA 879
            .||.::...:..||:.||.||.:||.|.::|.||||||.|||:||.:|||::|||:.|  ..||:
 Frog   864 GDAKAIYEKVSAQGETVRKLKTEKAPKDQVDGAVKTLLALKAEYKQVTGQEYKPGSPP--VVPSS 926

  Fly   880 SAAPSVG---VNDSVAQILSQITAQGDKVRELKSAKADKATVDAAVKTLLSLKADYKAATGSDWK 941
            |:.|...   .|.|...:.:::..||:.||:|||.||.|..||||||.||.|||:||..||.::|
 Frog   927 SSPPPASQSFSNTSDLILYNRVVEQGEVVRQLKSKKAPKDEVDAAVKLLLKLKAEYKQLTGQEYK 991

  Fly   942 PGT-TAPAPAAAPVKVKQEKNPDPASVLTVNTLLNKIAQQGDKIRQLKSAKSEKSLVEAEVKLLL 1005
            |.| ....|::.|.||.....|...|.....:|..|:|:|||.:|:|||.|:.|..|:..|||||
 Frog   992 PQTPPLSQPSSEPSKVLSGSEPAALSSTDCASLYEKVAEQGDLVRKLKSEKAPKDKVDEAVKLLL 1056

  Fly  1006 ALKTDYKSLTGQEWKPG-TVAPAPTTVNVIDLT----GGDSGSDVGSVLSKIQAQGDKIRKLKSE 1065
            |||.:||..||||:||| |.|.|||...:...|    .|...::...:.:::..||:::||:|||
 Frog  1057 ALKAEYKEKTGQEYKPGQTPAAAPTKKALEKPTSSQANGSHSAEAEELYNRVARQGEEVRKVKSE 1121

  Fly  1066 KAAKNVIDPEVKTLLALKGEYKTLSGKDWTPDAKSEPAVVKKEASPVSMASPAKDELTQEINAQG 1130
            ||||:.:|..||.||.||.:||.|:|.::.|                 :|:|:.:          
 Frog  1122 KAAKDKVDAAVKELLDLKAQYKALTGTEYKP-----------------VAAPSSE---------- 1159

  Fly  1131 EKVRAAKGNKAAKEVIDAEVAKLLALKAKYKEVTGTDFPVAGRGGGGGGGSAKKAPKEAQPKPAK 1195
            ||....|.||:.|:...::                     ||.|           ||:..  .:|
 Frog  1160 EKKHKEKENKSEKQSKQSK---------------------AGEG-----------PKKKD--TSK 1190

  Fly  1196 PVKKEPAADASGAVKKQTRLGLEATKEDNLPDWYSQVITKGEMIEYYDVSGCYILRQWSFAIWKA 1260
            ......||..|...||||||||||.||:||||||||||||.||||||||||||:||.|:||||:|
 Frog  1191 DQGDNSAAGESQGPKKQTRLGLEAKKEENLPDWYSQVITKSEMIEYYDVSGCYVLRPWAFAIWEA 1255

  Fly  1261 IKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDLAEPIAVRPTSET 1325
            ||.:||.||.::||:.||||:|||:|.|||||||||||||||||||:||.::|||||||||||||
 Frog  1256 IKEFFDKEIKKLGVENCYFPMFVSQAALEKEKTHIADFAPEVAWVTRSGKTELAEPIAVRPTSET 1320

  Fly  1326 VMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAFADKEEAAKEVLDI 1390
            ||||||||||||:|||||:||||.||||||||.|.||||||||||||||||||..||||:|||.|
 Frog  1321 VMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFATYEEAAEEVLQI 1385

  Fly  1391 LDLYALVYTHLLAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGRAIQGATSHHLGQNFSKMFEI 1455
            |||||.||..|||||||||||||||||||||||||||||||||.|||||||||||||||||||||
 Frog  1386 LDLYARVYEDLLAIPVVKGRKTEKEKFAGGDYTTTVEAFISASSRAIQGATSHHLGQNFSKMFEI 1450

  Fly  1456 VYEDPETQ-QKKYVYQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDE 1519
            |:|||:|. .|:|.||||||::|||||.|.||||||.|:||||.|||:|.|::|||||....:::
 Frog  1451 VFEDPKTPGLKQYAYQNSWGLSTRTIGAMTMVHADNIGMVLPPRVACVQVIIIPCGITNTLSEED 1515

  Fly  1520 RAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVRR 1584
            :..||..|....|||:...||...|.|||||||||||||||||||:||||||:|:|.:|.|||||
 Frog  1516 KDALLKKCDQYLKRLLNVDVRARADVRDNYSPGWKFNHWELKGVPIRLEVGPRDMKNKQFVAVRR 1580

  Fly  1585 DTVEKITIPLADVEKKIPALLETIHESMLNKAQEDMTSHTKKVTNWTDFCGFLEQKNILLAPFCG 1649
            |..||.||.....|.::..:||.||.::.|:|..|:||:........||...||:..|:..||||
 Frog  1581 DNGEKQTISEDQAETRLKEILEEIHTNLYNRALSDLTSNMVVANTMEDFQKNLEKGRIVQIPFCG 1645

  Fly  1650 EISCEDKIKADSARGEEAEPGAPAMGAKSLCIPFDQPAPIAASDKCINPSC-TNKPKFYTLFGRS 1713
            ||.|||.||..:||.::.|||||:||||||||||...:.:..|.||:   | .|..|||||||||
 Frog  1646 EIECEDWIKKVTARDQDLEPGAPSMGAKSLCIPFKPLSELQPSAKCV---CEKNAAKFYTLFGRS 1707

  Fly  1714 Y 1714
            |
 Frog  1708 Y 1708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492 408/726 (56%)
GST_C_GluProRS_N 76..153 CDD:198342 30/82 (37%)
tRNA-synt_1c 203..508 CDD:279135 229/304 (75%)
tRNA-synt_1c_C 510..688 CDD:281883 97/177 (55%)
WHEP-TRS 748..799 CDD:278865 33/50 (66%)
WHEP-TRS 821..870 CDD:278865 26/48 (54%)
WHEP-TRS 894..945 CDD:278865 28/51 (55%)
WEPRS_RNA 973..1022 CDD:238473 28/48 (58%)
WHEP-TRS 1050..1100 CDD:278865 23/49 (47%)
WHEP-TRS 1122..1168 CDD:278865 6/45 (13%)
PRK08661 1220..1714 CDD:236327 344/495 (69%)
ProRS_core_arch_euk 1224..1486 CDD:238401 218/262 (83%)
ProRS_anticodon_zinc 1492..1714 CDD:238439 118/222 (53%)
eprs1XP_031758973.1 PLN02907 52..753 CDD:215492 410/729 (56%)
WEPRS_RNA 798..847 CDD:238473 31/48 (65%)
WEPRS_RNA 869..916 CDD:238473 24/46 (52%)
WEPRS_RNA 944..992 CDD:238473 25/47 (53%)
WEPRS_RNA 1024..1073 CDD:238473 28/48 (58%)
WEPRS_RNA 1104..1152 CDD:238473 22/47 (47%)
PRK08661 1215..1708 CDD:236327 344/495 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 499 1.000 Domainoid score I353
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1800 1.000 Inparanoid score I64
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D111937at33208
OrthoFinder 1 1.000 - - FOG0002386
OrthoInspector 1 1.000 - - oto103291
Panther 1 1.100 - - LDO PTHR43382
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1809
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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