DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12268 and FAR1

DIOPT Version :9

Sequence 1:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_011518702.1 Gene:FAR1 / 84188 HGNCID:26222 Length:518 Species:Homo sapiens


Alignment Length:536 Identity:179/536 - (33%)
Similarity:285/536 - (53%) Gaps:49/536 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCVIFGKL 79
            |.::|..|.:|:||||||:||||:|||||||..:|.:|:|:|.|.|..|..|.|:.....:|.:|
Human     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRL 68

  Fly    80 LEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVVGTL 144
            .::||...:|:..:..:|.:|.|.||..|...:..:..::|||||.|||::.||..|.:||:.|.
Human    69 RDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATR 133

  Fly   145 KVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYPAPQNPFSIIEMVETMDDEALAEITPKLLN 209
            :::.||::|..|:..:||||:|..||...::|..||.|.:|..:|:.:|.|||..:.:|||||:.
Human   134 QLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIG 198

  Fly   210 GLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGLMIGAARGVIR 274
            ..||||.|:|||:|.::.:...||.:.|.|||||.|:..||.||||:..|||:||.|.|.:|::|
Human   199 DRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILR 263

  Fly   275 SMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSKALMSWGD----S 335
            ::..:.:..:.::|||..:|..:...:..|   ..:..:...:...|....|.....||:    .
Human   264 TIRASNNALADLVPVDVVVNMSLAAAWYSG---VNRYMRPRNIMVYNCTTGSTNPFHWGEVEYHV 325

  Fly   336 IETGRRFFYETPLSFALWYPGGSIKKNY--YHHLFCVIFFHYLPAYFIDFWLLVFGQKPFLLNVQ 398
            |.|    |...||..|...|..::..|:  ||:...|  .|..||:..|.:|.:.|:.|.::...
Human   326 IST----FKRNPLEQAFRRPNVNLTSNHLLYHYWIAV--SHKAPAFLYDIYLRMTGRSPRMMKTI 384

  Fly   399 RKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQVNWETYISNYIVGMRTYIL 463
            .::...:..|:|:|:..|.:..|....:.:||:..|:..|:..|.|::|..||.||.:|.:.|:|
Human   385 TRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTKKYVL 449

  Fly   464 GESEDTLPQARKVLRR-----------LYILDW---------VSKVLFF--SLSFWFLWTHLDGF 506
            .|....||.|||.|.:           |.||.|         ...:.:|  ||.:.||       
Human   450 NEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFL------- 507

  Fly   507 VERSDAFIRSSLSTIY 522
                 ::.|:|.:..|
Human   508 -----SYFRASSTMRY 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 159/453 (35%)
FAR-N_SDR_e 22..347 CDD:187547 124/328 (38%)
FAR_C 372..463 CDD:176924 25/90 (28%)
FAR1XP_011518702.1 PLN02996 2..449 CDD:215538 159/453 (35%)
FAR-N_SDR_e 11..333 CDD:187547 124/328 (38%)
Sterile 360..450 CDD:281068 25/89 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157523
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.850

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