DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12268 and CG4770

DIOPT Version :9

Sequence 1:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_650848.1 Gene:CG4770 / 42375 FlyBaseID:FBgn0038751 Length:490 Species:Drosophila melanogaster


Alignment Length:501 Identity:139/501 - (27%)
Similarity:256/501 - (51%) Gaps:33/501 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ESDIAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCVIF 76
            ::||   |.:..:.|||||||:||.|:||||.|...:..||:|||.|.||....|...:.:..||
  Fly    12 QTDI---YQDAVVFITGATGFVGKSLLEKLLWSFPQIKRIYMLIRPKGGVTVEERFRGFLQNPIF 73

  Fly    77 GKLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVV 141
            .::..::|..:.|:....|::.:.:|||:.:|.:.|.:.|.::||.||.|||::.|:....:|..
  Fly    74 ERIKSEHPTQLKKIFHFSGNIEDDNLGLNESDRSVLCAEVNIIFHSAATVRFNECLKVSARVNSQ 138

  Fly   142 GTLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYPA--PQNPFSIIEMVETMDDEALAEIT 204
            .|..:|.|..:|..|::.::|||:||......::|:.||.  |.:....:...:.:.|:.|..:.
  Fly   139 ATYNLLELCRQMPYLRSFLYVSTAYCNPGRKYVDEQVYPTMPPVDWRQFLSATQKIPDDYLNRLA 203

  Fly   205 PKLLNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGLMIGAA 269
            ..:.....|||.::|:::|.::..|.:.:||:|.||||||||..||.||||:.:...:|:|:...
  Fly   204 DYIKGPHVNTYTFTKSIAEQIVNAYKDVIPIVIVRPSIVTAAYREPYPGWIDNIQAISGIMMEIG 268

  Fly   270 RGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSKALMSWGD 334
            :|.|.|:..|.|....:||||..:|.||:   ..|||      |...:..||........::|..
  Fly   269 KGGISSILGNKDLICDIIPVDFVVNAMIM---MVGKA------KLGSLSICNATSGVTNPITWQH 324

  Fly   335 SIETGRRFFYETPLSFALWYPGGSIKKNYYHHLFCVIFFHYLPAYFIDFWLLVFGQKPFLLN-VQ 398
            ..|...::....|....:.:|....:.:.::|...|...|::||..:|...|:..||..|:. :.
  Fly   325 LGELTMKWSRIYPTRRMIMFPNFKYRCSAFNHELAVWVLHFVPALLMDLQTLLLAQKKRLVTPIA 389

  Fly   399 RKVSMGLKLLQYYTTKRWEFRNER---FQEMSSQLSLLDQDLFDT---SVGQVNWETYISNYIVG 457
            :|.........:::...|.|:|:.   |:||      ::...:.|   ::.:::::.|:..:::|
  Fly   390 KKFRQACLAGSFFSLNEWIFKNKSRFYFKEM------IENGTYPTLYWNLEEMDYDEYVRRHMIG 448

  Fly   458 MRTYILGESEDTLPQARKVLRRLYILDWVSKVLFFSLSFWFLWTHL 503
            :..| |...:.|:...:.::.|:|.. |:    |..|.|:.:..::
  Fly   449 INKY-LHREKFTVDSNKFMVTRIYWF-WI----FLHLMFYMMLVYI 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 131/459 (29%)
FAR-N_SDR_e 22..347 CDD:187547 105/326 (32%)
FAR_C 372..463 CDD:176924 19/97 (20%)
CG4770NP_650848.1 WcaG 21..358 CDD:223528 108/345 (31%)
FAR-N_SDR_e 21..337 CDD:187547 105/324 (32%)
Sterile 364..455 CDD:281068 20/97 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466771
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28069
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1110.910

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