DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12268 and CG30427

DIOPT Version :9

Sequence 1:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster


Alignment Length:486 Identity:199/486 - (40%)
Similarity:306/486 - (62%) Gaps:5/486 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SDIAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCVIFG 77
            |.:.::|.:|||.||||:|||||||:||||.||..|..:.::.|.|:|..|..|.|:.||..||.
  Fly     6 SPVQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQ 70

  Fly    78 KLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVVG 142
            ::.::.|.::.:|.:.:||:....||||......:..|..:|||.||.::.:..||..:.||::|
  Fly    71 RIKDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLG 135

  Fly   143 TLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYPAPQNPFSIIEMVETMDDEALAEITPKL 207
            |.:.|.:|::|.||:|.:|:||::|.|::.|:.|:.|..|..|..::.:.|.||.:.|..|||.|
  Fly   136 TRRALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAEWMDVKTLDAITPDL 200

  Fly   208 LNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGLMIGAARGV 272
            |...||||.|||.|:|.|:..:...:|:||.||||||.|:.||||||::.:|||||::|||.:||
  Fly   201 LKPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKGV 265

  Fly   273 IRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSKALMSWGDSIE 337
            ||||.||.:..|.|||||.||||:||..|....|  ||...|  :...||.:......:|...::
  Fly   266 IRSMICNGELKSEVIPVDIAINGLILLPYHNSLA--EKRPLQ--IPVYNLTVDDAKKRTWKWIMD 326

  Fly   338 TGRRFFYETPLSFALWYPGGSIKKNYYHHLFCVIFFHYLPAYFIDFWLLVFGQKPFLLNVQRKVS 402
            .||....:.|....||||.|::..:.::|..|.|.|.:||||.|||.||:|||:.|::.||.|::
  Fly   327 VGRDLGIKYPFEVGLWYPDGNMTSSKFYHTICTILFMWLPAYLIDFLLLIFGQRRFMIRVQTKIA 391

  Fly   403 MGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQVNWETYISNYIVGMRTYILGESE 467
            :||::||::||:.|:|::..|:::..:|...|:.:|..:...|:...|:...|:|.|.|::.|..
  Fly   392 VGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMKVSILGGRQYVMKEPL 456

  Fly   468 DTLPQARKVLRRLYILDWVSKVLFFS-LSFW 497
            .:||::|..||.:|:||.:.|.:..| |.:|
  Fly   457 TSLPKSRIQLRFMYVLDRICKTMIISGLLYW 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 186/449 (41%)
FAR-N_SDR_e 22..347 CDD:187547 140/324 (43%)
FAR_C 372..463 CDD:176924 35/90 (39%)
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 137/309 (44%)
Sterile 364..453 CDD:281068 34/88 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466732
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

Return to query results.
Submit another query.