DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12268 and CG8303

DIOPT Version :9

Sequence 1:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001286495.1 Gene:CG8303 / 36858 FlyBaseID:FBgn0034143 Length:543 Species:Drosophila melanogaster


Alignment Length:510 Identity:152/510 - (29%)
Similarity:247/510 - (48%) Gaps:56/510 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCVIFGKL 79
            |.:|:|:|.|.:||.|||:|.||:|.||.:..|:..||:|:|.|:..||:.|..:..:..||.|.
  Fly    39 IPEFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKRKFDPNERIRRLLQKPIFEKY 103

  Fly    80 LEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVVGTL 144
            .||.   :.||..|.|:|.||:.|........|...|.|::|.||.::|..|||..:..|:.||:
  Fly   104 SEKT---LSKVVPVVGELSEPNFGFGPELLQELIDRVNVIYHSAATIKFSSPLRTAIRTNLTGTM 165

  Fly   145 KVLRLAEKMSQLQALVHVSTSYCQC-NESVLEERAYPAPQNPFSIIEMVETMDDEALAEITPKLL 208
            :.:.||:::.||.|.::.||::|.. |..::.|..|.:..:|:.:::|.|  ||.|..:.|.:..
  Fly   166 RTIELAKQLKQLAAYIYCSTAFCNSNNRGLIAEEVYKSQFDPYEMMKMAE--DDSAWEDFTDQKC 228

  Fly   209 NGL----PNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVN-GPTGLMIGA 268
            .|.    ||||.::|.|||:|:....:.||..|.|||||...:..|:.||:...| |..|.:.|.
  Fly   229 KGYIRDHPNTYTFTKNLSENLLMAEMSGLPAAIVRPSIVYGTLEHPMKGWVGNANSGHLGFLAGF 293

  Fly   269 ARGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKG----------NKQTGVEFCNLC 323
            .:|:.|:|..|.:....:||.|..||..::.|:..|....|:.          |.....|||.:.
  Fly   294 VKGIFRTMCGNANAVIDIIPCDYVINSSLVMGWYVGTRKLEQPEIIHCTSGEVNPLNLAEFCTII 358

  Fly   324 ISSKALMSWGDSIETGRRFFYETPLSFALWYPGGSIKKNYYHHLFCVIFFHYLPAYFIDFWLLVF 388
                     .||:|.      ..|.|| :|.|...::..:.::||..: ||.|||     .:.:.
  Fly   359 ---------NDSVER------HPPNSF-VWKPVTKLRNGWRYNLFFYL-FHLLPA-----MVFII 401

  Fly   389 GQKPFLLNV--------QRKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQV 445
            .:|.|.:.:        .|....|.|...|:..|.:.:..:....:|:.:...|:..::....|.
  Fly   402 PEKLFGIGMPQHTAYEYMRVFQKGTKAFDYFLDKDFRYSLKNALRISALIPESDRRRYNFDASQC 466

  Fly   446 NWETYISNYIVGMRTYILGESEDTLPQAR---KVLRRLYILDWV--SKVLFFSLS 495
            :|..:|...::|:|.:...||..|....|   ||...||...:|  ..||:|:|:
  Fly   467 DWSEFIDRCLIGIRRFYFKESAVTTDWHRNYWKVFNVLYYAGYVVIFAVLYFALT 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 139/471 (30%)
FAR-N_SDR_e 22..347 CDD:187547 110/340 (32%)
FAR_C 372..463 CDD:176924 19/98 (19%)
CG8303NP_001286495.1 FAR-N_SDR_e 46..366 CDD:187547 110/339 (32%)
Sterile 392..485 CDD:281068 18/97 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466745
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
88.000

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