DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12268 and CG1441

DIOPT Version :9

Sequence 1:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster


Alignment Length:512 Identity:190/512 - (37%)
Similarity:290/512 - (56%) Gaps:35/512 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DADCGESD-IAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQY 70
            :.|..|.| ||:.:..:::.|||.|||:||||||||||||..|..||||||.|||.||..|.:..
  Fly    19 EIDDNEVDRIAECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDI 83

  Fly    71 FKCVIFG--KLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLR 133
            |:.|:|.  |.:.....|:.:|..:.||:|.|.||:|..|..||...|.:|:||||.||||:|||
  Fly    84 FQNVLFDQVKQMRGEEHILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDEPLR 148

  Fly   134 PMVMMNVVGTLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYPAPQNPFSIIEMVETMDDE 198
            ..|.||..||..:|.||..:..|....:.||:||..:...|.|:.|..|.:|..:::..|.:.|:
  Fly   149 NAVFMNTRGTKYMLELALTLKHLDFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQACEWLTDD 213

  Fly   199 ALAEITPKLLNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTG 263
            .:|.|..|:|..:||||||:|:|:|.|:.....:||.:|.|||||.....||:|||.:.:|||||
  Fly   214 EVATIERKVLGAIPNTYAYTKSLAEALVVEKFEELPAVILRPSIVIPIWKEPIPGWTDNINGPTG 278

  Fly   264 LMIGAARGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSKA 328
            |:|||.:||||:|:||.......:|||.|:||:::..::...|..:|.|:     ..::..|:..
  Fly   279 LLIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILVASWRNITAGTDKTNR-----VAHMTSSNDI 338

  Fly   329 LMSWGDSIETGRRFF-YETPLSFALWYPGGSIKKNYYHHLFCVIFFHYLPAYFIDFWLLVFGQKP 392
            .:||.:.||.||... .:.||:...||||||:|.||:.|..|::.|.::||.|:|..|.:....|
  Fly   339 KVSWAEIIELGRWVIENKVPLNGVAWYPGGSMKSNYWVHFICMVLFQWMPALFVDALLWILRYPP 403

  Fly   393 FLLNVQRKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLS----------LLDQDLFDTSVGQVNW 447
            .|..||.::..|.::.:||....|.|.|....::...::          .::.||.|        
  Fly   404 VLCRVQNRIYKGFEVFEYYANNVWNFDNSEAVKLRKLMNNKERRTYVIEKIELDLID-------- 460

  Fly   448 ETYISNYIVGMRTYILGESEDTLPQARKVLRRLYILD------WVSKVLFFSLSFWF 498
              |.:|.::..|..||.||::::|.||:.::.::::|      |:..:|:.....:|
  Fly   461 --YFTNCVLCARRLILKESDESIPAARRHMKVMWVVDKVYKGIWIFGILYMLYRCFF 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 178/464 (38%)
FAR-N_SDR_e 22..347 CDD:187547 139/327 (43%)
FAR_C 372..463 CDD:176924 22/100 (22%)
CG1441NP_610535.1 PLN02996 24..464 CDD:215538 176/454 (39%)
FAR-N_SDR_e 35..348 CDD:187547 136/317 (43%)
Sterile 385..475 CDD:281068 22/99 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466734
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 1 0.950 - 0.712175 Normalized mean entropy S3219
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1110.850

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