DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdh and GDH1

DIOPT Version :9

Sequence 1:NP_524470.4 Gene:Gdh / 42832 FlyBaseID:FBgn0001098 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_197318.1 Gene:GDH1 / 831935 AraportID:AT5G18170 Length:411 Species:Arabidopsis thaliana


Alignment Length:389 Identity:161/389 - (41%)
Similarity:222/389 - (57%) Gaps:46/389 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 DEKKQKVKGILMLMQPCDHI-IEIAFPLRRDAGNYEMITGYRAQHSTHKTPTKGGIRFSLDVSRD 150
            |.|.:|     .|:.|...| :|...|  :|.|......|:|.||...:.|.|||||:..:|..|
plant    21 DSKLEK-----SLLIPFREIKVECTIP--KDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPD 78

  Fly   151 EVKALSALMTFKCACVDVPFGGAKAGLKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAP 215
            ||.||:.|||:|.|...:|:||||.|:..:|.:.|..|||::||.||.::  ...||...|||||
plant    79 EVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERLTRVFTQKI--HDLIGIHTDVPAP 141

  Fly   216 DMGTGEREMSWIADTYAKTIGHLDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINEANY 280
            |||||.:.|:||.|.|:|..|:    :.|.||||||:.||..||.:||||||..|.|..:||.  
plant   142 DMGTGPQTMAWILDEYSKFHGY----SPAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNEH-- 200

  Fly   281 MSQIGTTPGWGGKTFIVQGFGNVGLHTTRYLTRAGATCIGVIEHDGTLYNPEGID-PKLLEDYKN 344
                |.|  ..|:.|::|||||||....:.::..|...:.|.:..|.:.|.:||| |.||:..| 
plant   201 ----GKT--ISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDIPALLKHTK- 258

  Fly   345 EHGTIVGYQNAKPYEGENLMFEKCDIFIPAAVEKVITSENANRIQAKIIAEAANGPTTPAADKIL 409
            ||..:.|:..|.|.:..:::.|.|||.:|||:..||..||||.|:||.|.||||.||.|.||:||
plant   259 EHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENANEIKAKFIIEAANHPTDPDADEIL 323

  Fly   410 IDRNILVIPDLYINAGGVTVSFFEWLKNLNHVSYGRLTFKYERESNYHLLASVQQSIERIINDE 473
            ..:.::::||:|.|:||||||:|||::|:.       .|.:|.|.               :|||
plant   324 SKKGVVILPDIYANSGGVTVSYFEWVQNIQ-------GFMWEEEK---------------VNDE 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GdhNP_524470.4 GdhA 98..560 CDD:223411 158/378 (42%)
ELFV_dehydrog_N 104..233 CDD:280903 58/129 (45%)
NAD_bind_1_Glu_DH 254..552 CDD:133445 89/221 (40%)
GDH1NP_197318.1 PLN02477 1..410 CDD:178095 161/389 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1308
eggNOG 1 0.900 - - E1_COG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 281 1.000 Inparanoid score I872
OMA 1 1.010 - - QHG54967
OrthoDB 1 1.010 - - D692851at2759
OrthoFinder 1 1.000 - - FOG0001473
OrthoInspector 1 1.000 - - mtm1157
orthoMCL 1 0.900 - - OOG6_100455
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1737
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.740

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