DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdh and GDH2

DIOPT Version :9

Sequence 1:NP_524470.4 Gene:Gdh / 42832 FlyBaseID:FBgn0001098 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001119183.1 Gene:GDH2 / 830635 AraportID:AT5G07440 Length:411 Species:Arabidopsis thaliana


Alignment Length:356 Identity:148/356 - (41%)
Similarity:205/356 - (57%) Gaps:24/356 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LMQPCDHI-IEIAFPLRRDAGNYEMITGYRAQHSTHKTPTKGGIRFSLDVSRDEVKALSALMTFK 162
            ||.|...| :|...|  :|.|......|:|.||...:.|.|||||:..:|..|||.||:.|||:|
plant    28 LMIPFREIKVECTIP--KDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWK 90

  Fly   163 CACVDVPFGGAKAGLKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWI 227
            .|..|:|:||||.|:..:|::.|..|||::||.||.::  ...||...|||||||||..:.|:||
plant    91 TAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKI--HDLIGIHTDVPAPDMGTNAQTMAWI 153

  Fly   228 ADTYAKTIGHLDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINEANYMSQIGTTPGWGG 292
            .|.|:|..||    :.|.||||||:.||..||.:||||||....|..:.|.....|        |
plant   154 LDEYSKFHGH----SPAVVTGKPIDLGGSLGREAATGRGVVFATEALLAEYGKSIQ--------G 206

  Fly   293 KTFIVQGFGNVGLHTTRYLTRAGATCIGVIEHDGTLYNPEGIDPKLLEDYKNEHGTIVGYQNAKP 357
            .||::|||||||....:.:...|...:.|.:..|.:.||||||...|..:|:..|::..:.....
plant   207 LTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHKDATGSLNDFNGGDA 271

  Fly   358 YEGENLMFEKCDIFIPAAVEKVITSENANRIQAKIIAEAANGPTTPAADKILIDRNILVIPDLYI 422
            ...:.|:..:||:.||.|:..|:..|||..::||.|.||||.||.|.||:||..:.::::||:|.
plant   272 MNSDELLIHECDVLIPCALGGVLNKENAGDVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYA 336

  Fly   423 NAGGVTVSFFEWLKNLNHVSYGRLTFKYERE 453
            ||||||||:|||::|:.       .|.:|.|
plant   337 NAGGVTVSYFEWVQNIQ-------GFMWEEE 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GdhNP_524470.4 GdhA 98..560 CDD:223411 148/356 (42%)
ELFV_dehydrog_N 104..233 CDD:280903 58/129 (45%)
NAD_bind_1_Glu_DH 254..552 CDD:133445 77/200 (39%)
GDH2NP_001119183.1 PLN02477 1..410 CDD:178095 148/356 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1308
eggNOG 1 0.900 - - E1_COG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55885
Inparanoid 1 1.050 281 1.000 Inparanoid score I872
OMA 1 1.010 - - QHG54967
OrthoDB 1 1.010 - - D692851at2759
OrthoFinder 1 1.000 - - FOG0001473
OrthoInspector 1 1.000 - - mtm1157
orthoMCL 1 0.900 - - OOG6_100455
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1737
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.740

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