DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS19b and rps1901

DIOPT Version :9

Sequence 1:NP_001262891.1 Gene:RpS19b / 42830 FlyBaseID:FBgn0039129 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_596593.1 Gene:rps1901 / 2540447 PomBaseID:SPBC21C3.13 Length:144 Species:Schizosaccharomyces pombe


Alignment Length:144 Identity:66/144 - (45%)
Similarity:91/144 - (63%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLY 65
            |.||:||::|........|||||:|||:..|:....:|||..||.||.|.||:|.|.|:|.||:|
pombe     1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIY 65

  Fly    66 LRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRN 130
            ||...|||...|||.|....|:|||.|...|....||.:|:||...::|:..:|||:::.||||:
pombe    66 LRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRD 130

  Fly   131 LDRIANKIVAKQRE 144
            |||||..::.::.|
pombe   131 LDRIAYSLLEEESE 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS19bNP_001262891.1 Ribosomal_S19e 5..138 CDD:279436 62/132 (47%)
rps1901NP_596593.1 Ribosomal_S19e 5..138 CDD:279436 62/132 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 143 1.000 Domainoid score I1166
eggNOG 1 0.900 - - E1_COG2238
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I1319
OMA 1 1.010 - - QHG62169
OrthoFinder 1 1.000 - - FOG0001026
OrthoInspector 1 1.000 - - mtm9295
orthoMCL 1 0.900 - - OOG6_100904
Panther 1 1.100 - - O PTHR11710
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X617
TreeFam 1 0.960 - -
1211.830

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