DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and RPT4

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_014902.3 Gene:RPT4 / 854433 SGDID:S000005785 Length:437 Species:Saccharomyces cerevisiae


Alignment Length:439 Identity:168/439 - (38%)
Similarity:259/439 - (58%) Gaps:27/439 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GQNQSAQGGAGEKKDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRC----RLKLL 62
            |.|.:.|....:.:..::.::.:|.. |:||.               |:...|.:.    :.|||
Yeast    17 GDNHTQQSHEQQPEQPQETEEHHEEE-PSRVD---------------PEQEAHNKALNQFKRKLL 65

  Fly    63 KLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVG 127
            :..|..|.|....:.||:.|:|..:.|.:.:....:..|.|..|     :|:.::.: ||..|.|
Yeast    66 EHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVM-----KELSEEKY-IVKASSG 124

  Fly   128 SEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQ 192
            ..:.|.:.:.||:.:|:.|..|.|:.....::.:|..:|||:|..|...:..:.|:..||||..|
Yeast   125 PRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQ 189

  Fly   193 IQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 257
            |:|::|.:||||.:||.::.:||||||||:|||||||||||||||||....|.|:....|.::.|
Yeast   190 IRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDK 254

  Fly   258 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 322
            |:|:..:::||:|..|:||.|.|:|:||:||:|.:|:...:..:||||||::|||.|:||||:.|
Yeast   255 YIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLG 319

  Fly   323 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKD 387
            ..|:||||||.:||||||:||||:|||:|.|||:|..:..||.|||:::....:.:....:...|
Yeast   320 QTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSD 384

  Fly   388 DLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK-EGTPE 435
            ..:||||:...||||..|:|:.|..:..:|..|:...|...|| |||.|
Yeast   385 GFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIE 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 168/439 (38%)
RPT4NP_014902.3 PRK03992 66..433 CDD:179699 155/372 (42%)

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