DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and RPT1

DIOPT Version :9

Sequence 1:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_012777.1 Gene:RPT1 / 853712 SGDID:S000001628 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:468 Identity:179/468 - (38%)
Similarity:262/468 - (55%) Gaps:63/468 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYL----MMEDEFI 78
            |:..:||:.|:       :...|.||.    .::.|.|...:::||......|.    ..|::..
Yeast     4 KEDWEKYKAPL-------EDDDKKPDD----DKIVPLTEGDIQVLKSYGAAPYAAKLKQTENDLK 57

  Fly    79 RNQERLKPQDEKNEEER----SKVDDLRGT--------PMSVGNLEEIIDDNHAIVSTSV----- 126
            ..:.|:|.:....|.:.    |.:.|:.|.        |:.|....:||..|.....|:.     
Yeast    58 DIEARIKEKAGVKESDTGLAPSHLWDIMGDRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNS 122

  Fly   127 GSEHYVSILSFVDKDQLEPGCSVLLNHKVHA--VVGV---------------------------L 162
            |:.:..|.....|.|:.:.....::|.|..|  |||:                           |
Yeast   123 GNSNSNSNQQSTDADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPL 187

  Fly   163 SDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 227
            ....||.||:|.:|:.|..||:|:||...||::::|.|||||..||.:..:||.||||::|||||
Yeast   188 PPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPP 252

  Fly   228 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTK 292
            ||||||.|:||||:|.|||:||:||||:|||:|:|.::|||||.:|......|:|.|||||||..
Yeast   253 GTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGA 317

  Fly   293 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 357
            |:|..:||:.|:|||||||:.||||||.||::||:.||||..||||||:||||||||:||.|||.
Yeast   318 RFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDL 382

  Fly   358 KTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 422
            :.:..||.||:..|::...:....:.....:.:||:::::|||||:.|:|.||...|.:||.|:.
Yeast   383 EGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAV 447

  Fly   423 ESVL--YRKKEGT 433
            :.|:  |:|...|
Yeast   448 DKVISGYKKFSST 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 179/468 (38%)
RPT1NP_012777.1 RPT1 28..464 CDD:224143 172/433 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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