DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and RPT1A

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_175778.1 Gene:RPT1A / 841812 AraportID:AT1G53750 Length:426 Species:Arabidopsis thaliana


Alignment Length:418 Identity:174/418 - (41%)
Similarity:252/418 - (60%) Gaps:56/418 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 MEDEFIRNQERLKPQDE-------------------KNEEE----RSKVDDLRG----------- 103
            :||| ||:::..:|.||                   |.|:|    ..|::||.|           
plant     5 IEDE-IRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPP 68

  Fly   104 ---------------TPMSVGNLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSV 149
                           .|:.|....:||    :|...:::....::..|.:...|....:|.|..|
plant    69 SQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRV 133

  Fly   150 LLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMG 214
            .::...:.:...|....||.||:|.:|:.|..||.|:||...||::::|.||||:.|||.:.::|
plant   134 GVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLG 198

  Fly   215 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 279
            |.|||||:.||||||||||||:||||:|.|.|:||:||||:|||:|:|.::|||||::|......
plant   199 IDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC 263

  Fly   280 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPG 344
            |||.||:||:|..|:|...||:.|:||||||::|||||||:||::||:|||||.:||||||:|||
plant   264 IVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328

  Fly   345 RIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRER 409
            |:|||:||.|||.:::.:||.|||..|....|:....|.....:.:||||:::|||||:.|:|.|
plant   329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRAR 393

  Fly   410 RMKVTNEDFKKSKESVL--YRKKEGTPE 435
            |..||.:||..:...|:  |:|...||:
plant   394 RKTVTEKDFLDAVNKVIKGYQKFSATPK 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 174/418 (42%)
RPT1ANP_175778.1 PRK03992 113..423 CDD:179699 154/309 (50%)

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