DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and AT1G05910

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_563753.1 Gene:AT1G05910 / 837101 AraportID:AT1G05910 Length:1210 Species:Arabidopsis thaliana


Alignment Length:461 Identity:133/461 - (28%)
Similarity:207/461 - (44%) Gaps:92/461 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GQNQSAQGGAGEKKDDKDK--KKKY--------------------EPPIP---------TRVGKK 35
            |:::..:.|..:::.|:::  :|:|                    :|..|         ||||:.
plant   208 GEDEGEEDGDDDEEGDEEQEGRKRYDLRNRAEVRRMPTGEINKQQQPRSPRRVLHQGMGTRVGRD 272

  Fly    36 KRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDD 100
            .||...          .||.|.|  ..:.:...|.|::::           .|:......::..:
plant   273 GRRGGS----------RPHKRHR--FTRTDDSDDSLLVDE-----------LDQGPAIPWARGGN 314

  Fly   101 LRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLS-- 163
            ..|.|...|.|     |.:.  |:|:|               |..|.|. ..|:...:..:.|  
plant   315 RSGAPWLFGGL-----DTYG--SSSLG---------------LNVGASG-WGHQSDGLAALTSGV 356

  Fly   164 DDTDPM----VTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILY 224
            ....|.    ..:..|:......:.|||||...|.::||.|..||.:||::....|.||:||:|.
plant   357 QTAGPSSKGGADIQPLQINEDINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLC 421

  Fly   225 GPPGTGKTLLAKAVANQTS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFID 284
            |||||||||:|:|:|...|     .:|....|::::.|::|:..:.::.||..|:.:.|||:|.|
plant   422 GPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 486

  Fly   285 EIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 349
            |||.:...|..........|..|:|.|   :||.||||.|.:|.||||::.:|.||.||||.||:
plant   487 EIDGLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 548

  Fly   350 IEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAK-DDLSGADIKAICTEAGLMALRERRMKV 413
            ..|.||..:.:..|..|||.:........|.|.:.|. ....|||:||:||||.:.|.||:..:|
plant   549 FNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKYPQV 613

  Fly   414 TNEDFK 419
            ...|.|
plant   614 YTSDDK 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 133/461 (29%)
AT1G05910NP_563753.1 SpoVK 258..617 CDD:440232 124/407 (30%)
P-loop containing Nucleoside Triphosphate Hydrolases 382..551 CDD:476819 73/171 (43%)
Bromo_AAA 895..1005 CDD:99957
Blue background indicates that the domain is not in the aligned region.

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