DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and KATNAL2

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001340828.1 Gene:KATNAL2 / 83473 HGNCID:25387 Length:564 Species:Homo sapiens


Alignment Length:442 Identity:131/442 - (29%)
Similarity:204/442 - (46%) Gaps:94/442 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERL 84
            |.:||    |..|.|....|:.     .|||     |.|.|..:        ||.|. .:|..::
Human   108 KFQKY----PKIVKKSSDTAEN-----NLPQ-----RSRGKTRR--------MMNDS-CQNLPKI 149

  Fly    85 KPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE----P 145
            ..|..:::....|..|.:.......| :|::|      :|.:.|.::...:|.:.||..|    |
Human   150 NQQRPRSKTTAGKTGDTKSLNKEHPN-QEVVD------NTRLESANFGLHISRIRKDSGEENAHP 207

  Fly   146 GCSVLLNHK---VHAVVGVLSD--------DTDPMVTVMKLEKA--------------------- 178
            ....:::.:   ..|:.|..|:        :.||...::|...|                     
Human   208 RRGQIIDFQGLLTDAIKGATSELALNTFDHNPDPSERLLKPLSAFIGMNSEMRELAAVVSRDIYL 272

  Fly   179 --PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
              |...:.||.|||...|.:||:|..|:.:|:.:..: :.|.||::|||||||||||||||||.:
Human   273 HNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATE 336

  Fly   242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE-IQ 305
            ...||..:..|.::.|:.||..||||.||.:|..||||.:|:||:::|.::| .:.||||.| ..
Human   337 CKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR-GTASGGEHEGSL 400

  Fly   306 RTMLELLNQLDGFDSRGD-VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK----------- 358
            |...|||.|:||.....| |.|:.|:|....||.|::|  |::::|...||..:           
Human   401 RMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSREARQAMIYHWLP 463

  Fly   359 --TKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRE 408
              :|.|...:||       ::..|.|....:..||:|||.:|.||.:..:|:
Human   464 PVSKSRALELHT-------ELEYSVLSQETEGYSGSDIKLVCREAAMRPVRK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 131/442 (30%)
KATNAL2NP_001340828.1 LisH 51..81 CDD:128913
RPT1 212..548 CDD:440835 101/308 (33%)
RecA-like_VPS4-like 282..446 CDD:410917 75/167 (45%)
Blue background indicates that the domain is not in the aligned region.

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