DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and AT5G20000

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_197500.1 Gene:AT5G20000 / 832122 AraportID:AT5G20000 Length:419 Species:Arabidopsis thaliana


Alignment Length:377 Identity:185/377 - (49%)
Similarity:257/377 - (68%) Gaps:14/377 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 KLLKLERIKDYLMMEDEFIRNQERLKPQ-DEKNEEERSKVDDLR--GTPMS-VGNLEEIIDDNHA 120
            :|.:|:|.|.|         |..||:.| :|.|...|...::|:  ..|.| ||.:.:::..|..
plant    42 ELQRLQREKSY---------NLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKV 97

  Fly   121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYAD 185
            :|......::.|.|...:|..:|.|...|.|.:..:.:..||....||:|.:||:||.|..||..
plant    98 LVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDM 162

  Fly   186 IGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 250
            |||||.||:||||.:|||:.|||.:|.:||..||||:|||||||||||||:|||:.|..||:||.
plant   163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVS 227

  Fly   251 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQ 314
            ||||:|||:|:|.::|||||.:|.||||||:|:||||::|:.|.:|.|| |:.|:||||||||||
plant   228 GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQ 292

  Fly   315 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNL 379
            ||||::...:||:||||||:.||.||:||||||||||||.|:|:::..|..||:.:|.|...::|
plant   293 LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDL 357

  Fly   380 SELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 431
            .::....:..|||::||:|||||:.||||||:.||.|||:.:...|:.:..|
plant   358 KKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 185/377 (49%)
AT5G20000NP_197500.1 PRK03992 36..413 CDD:179699 185/377 (49%)

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