DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and ftsh3

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_850129.1 Gene:ftsh3 / 817456 AraportID:AT2G29080 Length:809 Species:Arabidopsis thaliana


Alignment Length:498 Identity:144/498 - (28%)
Similarity:220/498 - (44%) Gaps:104/498 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFI-- 78
            |:..|||.||...|    |.|:..|.       .|.:.|.....| .:.|.:.|..|...:.:  
plant    85 DEAPKKKNYENYFP----KDKQEPKS-------DQKSEHKEGSEK-NENENVGDMFMNRFQNLLI 137

  Fly    79 ----------------RNQERLKPQDEKNE-EERSKVDDL------------RGTPMSVGNLEEI 114
                            ..|:::..|:.||: .|...||.:            |.||......:.:
plant   138 PLLALAVFFSTFSFGSGEQQQISFQEFKNKLLEPGLVDHIDVSNKSVAKVYVRSTPKDQQTTDVV 202

  Fly   115 IDDNHAIVSTSVGSEH-YVSILSFVD--KDQLEPGCSVL-LNHKVHAVVGVLSDDTDPMV----- 170
            ..:.:.|.:...|.:: |...:..||  :::||.....| ::...:..|..:|:    ||     
plant   203 HGNGNGIPAKRTGGQYKYYFNIGSVDSFEEKLEEAQEALGVDRHEYVPVTYVSE----MVWYQEF 263

  Fly   171 -------------------------------------------TVMKLEKAPQET--YADIGGLD 190
                                                       |:.:.:|..:..  :.|:.|.|
plant   264 MRFAPTLLLLGTLIYGARRMQGGLGVGGTGGKNGRGIFNIGKATITRADKHSKNKIYFKDVAGCD 328

  Fly   191 TQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 255
            ...|||.|.|.. |.:|:.||::|.|.|||.:|.|||||||||||||.|.::...||.:.||:.:
plant   329 EAKQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFM 392

  Fly   256 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
            :.::|.||..||.||:.|.:.||||:|||||||:|..|.....||..|.:.|:.:||.::|||.:
plant   393 EMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGT 457

  Fly   321 RGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNL--SELI 383
            ...|.|:..|||.:.||.||:||||.||:|....||.|.:.:||.|:..::.|..:.:.  ..|.
plant   458 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLA 522

  Fly   384 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 426
            ......:||||..:|.||.|:|.|.....||...|:.:.:.|:
plant   523 ALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVI 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 144/498 (29%)
ftsh3NP_850129.1 HflB 139..759 CDD:440233 128/432 (30%)

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