DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and Katnal2

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001355584.1 Gene:Katnal2 / 71206 MGIID:1924234 Length:539 Species:Mus musculus


Alignment Length:436 Identity:133/436 - (30%)
Similarity:210/436 - (48%) Gaps:77/436 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KKDDKDKKKKYEP---PIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCR----------------- 58
            :|..|..||..:|   .:|:|.|.|.:|... |:...||::. |.:.|                 
Mouse    84 QKYPKVVKKAPDPVENNLPSRSGGKNKRLTN-DSCQNLPKIC-HQKSRPKTSAVKTGDTKSVKEH 146

  Fly    59 LKLLKLERIKDYLMMEDEFIRNQERL-KPQ-DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 121
            ||.:| |.:.|......:|..|..:: |.| :||.:..|.::.|.||                 :
Mouse   147 LKQVK-ESVTDTQAESTDFGLNISKIHKDQPEEKAQPRRGQIIDFRG-----------------L 193

  Fly   122 VSTSV-GSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMK---LEKAPQET 182
            :|.:: |:....::.:|    :..|..|..|...:.|.:|:.|:..:....|.:   |.. |...
Mouse   194 LSDAIKGATSEFALNTF----ECNPDPSERLLKPLSAFIGMNSEMRELAAVVSRDIYLHN-PNIK 253

  Fly   183 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 247
            :.||.|||...|.:||:|..|:.:|:.:..: :.|.||::|||||||||||||||||.:...||.
Mouse   254 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFF 317

  Fly   248 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE-IQRTMLEL 311
            .:..|.::.|:.||..||||.||.:|..||||.:|:||:::|.::| ....|||.| ..|...||
Mouse   318 NISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR-GMVPGGEHEGSLRMKTEL 381

  Fly   312 LNQLDGFDSRGD-VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK-------------TKRR 362
            |.|:||.....| |.|:.|:|....||.|::|  |::::|...||.::             :|..
Mouse   382 LVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSQEARQAMIYHWLPPVSKNH 444

  Fly   363 IFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRE 408
            ...:||       .:..|.|....:..||:|||.:|.||.:..:|:
Mouse   445 ALELHT-------QLEYSVLSQETEGYSGSDIKLVCREAAMRPVRK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 133/436 (31%)
Katnal2NP_001355584.1 LisH 25..55 CDD:128913
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..121 7/28 (25%)
RecA-like_VPS4-like 257..421 CDD:410917 74/167 (44%)
AAA_lid_3 457..495 CDD:465537 10/27 (37%)
Blue background indicates that the domain is not in the aligned region.

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