DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt2 and Katnal2

DIOPT Version :9

Sequence 1:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001355584.1 Gene:Katnal2 / 71206 MGIID:1924234 Length:539 Species:Mus musculus


Alignment Length:436 Identity:133/436 - (30%)
Similarity:210/436 - (48%) Gaps:77/436 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KKDDKDKKKKYEP---PIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCR----------------- 58
            :|..|..||..:|   .:|:|.|.|.:|... |:...||::. |.:.|                 
Mouse    84 QKYPKVVKKAPDPVENNLPSRSGGKNKRLTN-DSCQNLPKIC-HQKSRPKTSAVKTGDTKSVKEH 146

  Fly    59 LKLLKLERIKDYLMMEDEFIRNQERL-KPQ-DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 121
            ||.:| |.:.|......:|..|..:: |.| :||.:..|.::.|.||                 :
Mouse   147 LKQVK-ESVTDTQAESTDFGLNISKIHKDQPEEKAQPRRGQIIDFRG-----------------L 193

  Fly   122 VSTSV-GSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMK---LEKAPQET 182
            :|.:: |:....::.:|    :..|..|..|...:.|.:|:.|:..:....|.:   |.. |...
Mouse   194 LSDAIKGATSEFALNTF----ECNPDPSERLLKPLSAFIGMNSEMRELAAVVSRDIYLHN-PNIK 253

  Fly   183 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 247
            :.||.|||...|.:||:|..|:.:|:.:..: :.|.||::|||||||||||||||||.:...||.
Mouse   254 WNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECKTTFF 317

  Fly   248 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE-IQRTMLEL 311
            .:..|.::.|:.||..||||.||.:|..||||.:|:||:::|.::| ....|||.| ..|...||
Mouse   318 NISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR-GMVPGGEHEGSLRMKTEL 381

  Fly   312 LNQLDGFDSRGD-VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK-------------TKRR 362
            |.|:||.....| |.|:.|:|....||.|::|  |::::|...||.::             :|..
Mouse   382 LVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSQEARQAMIYHWLPPVSKNH 444

  Fly   363 IFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRE 408
            ...:||       .:..|.|....:..||:|||.:|.||.:..:|:
Mouse   445 ALELHT-------QLEYSVLSQETEGYSGSDIKLVCREAAMRPVRK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 133/436 (31%)
Katnal2NP_001355584.1 LisH 25..55 CDD:128913
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..121 7/28 (25%)
SpoVK <239..523 CDD:223540 94/257 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.