DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt2 and katnal2

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001410682.1 Gene:katnal2 / 641431 ZFINID:ZDB-GENE-051113-156 Length:525 Species:Danio rerio


Alignment Length:399 Identity:113/399 - (28%)
Similarity:195/399 - (48%) Gaps:45/399 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVD 99
            ||...:|.:..:|......||..|:..::....::.:...:..:..::..|..|   .:..:..|
Zfish    91 KKLAEQGENRRIKSCGKRSHTLPRINSIQRPSSRNTVKKSESKLTGRDFSKSSD---GDRLTSAD 152

  Fly   100 DL---------------RGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSV 149
            .|               .||.|...:...:|.|  |:...:..:.|..   .|.::::|....|.
Zfish   153 TLGFGLNVSPIIRNGAEEGTHMRKIDYRNLIQD--AVRGAANDTLHNA---DFTEQERLLKPVSA 212

  Fly   150 L--LNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEE 212
            |  :|..:..:..|:|.|       :.|.. |...:.||.||:...:.:||:|..|:.:|:.:..
Zfish   213 LIGMNSDMKELAAVISRD-------IYLHN-PNVRWDDIIGLEAAKRLVKEAVVYPIKYPQLFTG 269

  Fly   213 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 277
            : :.|.||::||||||||||:||||||.:.:.||..:..|.::.|:.||..||||.||.:|..||
Zfish   270 I-LSPWKGLLLYGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVRVLFELARYHA 333

  Fly   278 PSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGFDSRGD-VKVIMATNRIETLDPAL 340
            ||.:|:||:::|.::| ....||:.|..|.| .|||.|:||.....| |.|:.|:|....||.|:
Zfish   334 PSTIFLDELESVMSQR-GVGQGGDHEGSRRMKTELLVQMDGLARSNDLVFVLAASNLPWELDHAM 397

  Fly   341 IRPGRIDRKIEFPLPDEKTKRRIFT------IHTSRMTLAEDVNLSELIMAKDDLSGADIKAICT 399
            :|  |::::|...||....::.:.:      .:|..:.|..:::...|.......||:||:.:|.
Zfish   398 LR--RLEKRILVSLPSAPARQAMISHWLPPVSNTGGVELRTELDYDSLAQETGGYSGSDIRLVCK 460

  Fly   400 EAGLMALRE 408
            ||.:..:|:
Zfish   461 EAAMRPVRK 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 113/399 (28%)
katnal2NP_001410682.1 LisH 25..55 CDD:128913
RPT1 165..501 CDD:440835 102/322 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.