DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and katnal2

DIOPT Version :9

Sequence 1:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001032491.1 Gene:katnal2 / 641431 ZFINID:ZDB-GENE-051113-156 Length:485 Species:Danio rerio


Alignment Length:379 Identity:105/379 - (27%)
Similarity:183/379 - (48%) Gaps:45/379 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVD 99
            ||...:|....:|......||..|:..::....::.:...:..:..::..|..|   .:..:..|
Zfish    91 KKLAEQGESRRIKSCGKRSHTLPRINSIQRPSSRNTVKKSESKLTGRDFSKSSD---GDRLTSAD 152

  Fly   100 DL---------------RGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSV 149
            .|               .||.|...:...:|.|  |:...:..:.|..   .|.::::|....|.
Zfish   153 TLGFGLNVSPIIRNGAEEGTHMRKIDYRNLIQD--AVRGAANDTLHNA---DFTEQERLLKPVSA 212

  Fly   150 L--LNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEE 212
            |  :|..:..:..|:|.|       :.|.. |...:.||.||:...:.:||:|..|:.:|:.:..
Zfish   213 LIGMNSDMKELAAVISRD-------IYLHN-PNVRWDDIIGLEAAKRLVKEAVVYPIKYPQLFTG 269

  Fly   213 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 277
            : :.|.||::||||||||||:||||||.:.:.||..:..|.::.|:.||..||||.||.:|..||
Zfish   270 I-LSPWKGLLLYGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVRVLFELARYHA 333

  Fly   278 PSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGFDSRGD-VKVIMATNRIETLDPAL 340
            ||.:|:||:::|.::| ....||:.|..|.| .|||.|:||.....| |.|:.|:|....||.|:
Zfish   334 PSTIFLDELESVMSQR-GVGQGGDHEGSRRMKTELLVQMDGLARSNDLVFVLAASNLPWELDHAM 397

  Fly   341 IRPGRIDRKIEFPLPDEKTKRRIFT------IHTSRMTLAEDVNLSELIMAKDD 388
            :|  |::::|...||....::.:.:      .:|..:.|..:::...|...:::
Zfish   398 LR--RLEKRILVSLPSAPARQAMISHWLPPVSNTGGVELRTELDYDSLAQVQEE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 105/379 (28%)
katnal2NP_001032491.1 LisH 25..55 CDD:128913
P-loop_NTPase 242..>296 CDD:304359 27/54 (50%)
AAA 273..410 CDD:214640 63/139 (45%)
AAA 277..409 CDD:278434 60/134 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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