DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt2 and PSMC3

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_002795.2 Gene:PSMC3 / 5702 HGNCID:9549 Length:439 Species:Homo sapiens


Alignment Length:432 Identity:187/432 - (43%)
Similarity:273/432 - (63%) Gaps:31/432 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PPIPTRVGKKKRRAKGPDAAMK-------LPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQER 83
            |.|.:.|.::::.|...|.|.:       |...|.....|.:||..| ||   :|:.|.:|....
Human     5 PNIESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSE-IK---IMKSEVLRVTHE 65

  Fly    84 LKPQDEKNEEERSKVDDLRGTPMSVGNLEEIID---------------DNH-----AIVSTSVGS 128
            |:...:|.:|...|:...:..|..|.|:.|::|               |:.     |::.||...
Human    66 LQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQ 130

  Fly   129 EHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQI 193
            .:::.::..||.::|:||..|.:|...:.::..|..:.|..|..|::::.|.|.|:||||||.||
Human   131 TYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQI 195

  Fly   194 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 258
            ||:.|::.||:.|.|.:|.:||:|||||::||||||||||||:|.|.||.||||::.|.:|:|.:
Human   196 QELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMF 260

  Fly   259 LGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGD 323
            :|||.||||:.|.:|:|.||||:||||:||:||||:||...|:||:||||||||||||||.....
Human   261 IGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQ 325

  Fly   324 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDD 388
            ||||.||||::.|||||:|.||:|||||||:|:|:.:.||..||:.:|.::.|||..||....||
Human   326 VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDD 390

  Fly   389 LSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430
            .:||..||:|.|||::|||....::|:||:.:....|..:||
Human   391 FNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 187/432 (43%)
PSMC3NP_002795.2 PRK03992 39..432 CDD:179699 177/396 (45%)

Return to query results.
Submit another query.