DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and katnal1

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001007432.1 Gene:katnal1 / 492790 ZFINID:ZDB-GENE-041114-141 Length:488 Species:Danio rerio


Alignment Length:453 Identity:134/453 - (29%)
Similarity:204/453 - (45%) Gaps:107/453 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTP-------HTRCRLKLLKLERIKDYLMMEDE 76
            ||...:..|:|         .:||......|..||       ..:..:.|.|.:|.:...|....
Zfish    79 DKAVDFPNPVP---------EEGPRDPDVWPPPTPAEHRGPVQVKKPVPLSKPQRKESPGMQHRG 134

  Fly    77 FI-RNQERLKP--------QDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYV 132
            .: |.|..:||        :..|.:||:||    |.......::|:...|         |:.:..
Zfish   135 AVGRGQANIKPDRPNTRDGRGNKAKEEKSK----RNAQEGAADVEQKKFD---------GTGYDS 186

  Fly   133 SILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIK 197
            .::..:::|      .|..|..:|                          :.||..|:...:.::
Zfish   187 DLVDALERD------IVSRNPNIH--------------------------WDDIADLEDAKKLLR 219

  Fly   198 ESVELPLTHPEYYEEMGIKPP-KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD 261
            |:|.||:..|::::  ||:.| |||::.||||||||:||||||.:...||..|..|.|..||.|:
Zfish   220 EAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGE 282

  Fly   262 GPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI-QRTMLELLNQLDGF------- 318
            ..||||.||.:|..:||:.:||||||::..:|..|:   |.|. :|...|||.|:||.       
Zfish   283 SEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSD---EHEASRRVKSELLVQMDGVGGAQESE 344

  Fly   319 DSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELI 383
            |....|.|:.|||....:|.||.|  |::::|..|||..|.:..:..|:...:.:|.||:|:...
Zfish   345 DPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVDVASDVDLTVFA 407

  Fly   384 MAKDDLSGADIKAICTEAGLMALRER-----------------RMKVTNEDF----KKSKESV 425
            ...:..|||||..:|.:|.:||:|.|                 :|.||.|||    ||..:||
Zfish   408 EKIEGYSGADITNVCRDASMMAMRRRIQGLSPEEIRALSKDELQMPVTMEDFELALKKISKSV 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 134/453 (30%)
katnal1NP_001007432.1 Kp60-NTD 5..72 CDD:439297
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..184 24/121 (20%)
RecA-like_KTNA1 207..376 CDD:410930 74/175 (42%)
AAA_lid_3 400..444 CDD:465537 14/43 (33%)
Vps4_C <448..486 CDD:462762 10/23 (43%)
Blue background indicates that the domain is not in the aligned region.

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