DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and CG11594

DIOPT Version :9

Sequence 1:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001261391.1 Gene:CG11594 / 38473 FlyBaseID:FBgn0035484 Length:548 Species:Drosophila melanogaster


Alignment Length:253 Identity:54/253 - (21%)
Similarity:80/253 - (31%) Gaps:85/253 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VGKKKRRAKGPDAAMKL----PQVTPHT-----------------RCRLKLLKLERIKDYLMMED 75
            |.|.|.:..|.||...|    ||.:|.|                 |...:..::...|..|:   
  Fly    68 VDKSKVKGIGFDATCSLVVLGPQGSPLTVSKSGEAEQNIILWMDHRAEQETQEINAFKHSLL--- 129

  Fly    76 EFIRNQERLKPQDEKNEEERSKVDDL-RGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVD 139
            :::..|..|       |.|..|:..| |....:.||:..:.|....:...:.|          ||
  Fly   130 KYVGGQVSL-------EMEVPKLLWLKRNLSQTFGNIWRVFDLPDFLTWRATG----------VD 177

  Fly   140 KDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPL 204
            ...|   |||:......|..|..:.:   .:....||:..|..:..:|. |.|            
  Fly   178 TRSL---CSVVCKWNYDAANGSWNKE---FLKQADLEELTQNNFEKLGS-DVQ------------ 223

  Fly   205 THPEYYEEMGIKPPKGVILYGPPG--TGKTLLAKAVANQTSATFLRVVGSELIQKYLG 260
                                 |||  .||.|.||| |.:...:...||.:.||..:.|
  Fly   224 ---------------------PPGRTVGKGLTAKA-AGELGLSAGTVVSTSLIDAHAG 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 54/253 (21%)
CG11594NP_001261391.1 FGGY_YpCarbK_like 5..540 CDD:212663 54/253 (21%)
5C_CHO_kinase 6..540 CDD:273552 54/253 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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