Protein Alignment Rpt2 and YME1L

DIOPT Version :10

• Sequence 1: NP_524469.2
• Gene: Rpt2 / 42828
• FlyBaseID: FBgn0015282
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_001246473.1
• Gene: YME1L / 37636
• FlyBaseID: FBgn0034792
• Length: 740
• Species: Drosophila melanogaster
• Alignment Length: 436
• Identity: 132/436 - (30%)
• Similarity: 213/436 - (48%)
• Gaps: 66/436 - (15%)

  Fly    15 KDDK--DKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEF 77
            |.|:  :.::|..|.:.:|:  |...|..|   .:|...||        |:.|:::..|...:|.
  Fly   169 KTDRSIEAEQKRNPTMTSRL--KNALANSP---QRLDGDTP--------LQAEKLRRLLAKSEEH 220

  Fly    78 IRNQ-ERLKPQDEK------NEEERSKVDDLRGTPMS-VGNLEEIIDDNHAIVSTSVGSEHYVSI 134
            ..|: |.||....:      |.|:..|    .|..|. :..|:.|:     ::...:|     ..
  Fly   221 GFNKAESLKIAFAEGYLAAANSEDSPK----SGKTMKYLKTLQTIV-----VIVVFLG-----IF 271

  Fly   135 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQE---TYADIGGLDTQIQEI 196
            |||..........|:.|.::|                    |..|:|   |:.|:.|.|...||:
  Fly   272 LSFFTTSNGSVFRSIQLGNQV--------------------EVDPEEINVTFEDVKGCDEAKQEL 316

  Fly   197 KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD 261
            ||.||. |..||.:..:|.|.||||:|.|||||||||||:|||.:....|....|.|..:..:|.
  Fly   317 KEVVEF-LKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQ 380

  Fly   262 GPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKV 326
            |.:.||:||:.|:..||.::||||||:||.||  :||.......:|:.:||:::|||.....|.|
  Fly   381 GARRVRDLFKAAKARAPCVIFIDEIDSVGAKR--TNSVLHPYANQTINQLLSEMDGFHQNAGVIV 443

  Fly   327 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSG 391
            :.||||.:.||.||:||||.|.::....||...::.|.:::.::: |.::::|..|.......:|
  Fly   444 LGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LHDEIDLDMLARGTSGFTG 507

  Fly   392 ADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLY--RKKEGTPE 435
            ||::.:..:|.|.|..:....|:.:..:.:::.||.  .:|...|:
  Fly   508 ADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERKARLPD 553

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt2	NP_524469.2	PTZ00361	1..439	CDD:185575	132/436 (30%)
YME1L	NP_001246473.1	HflB	258..737	CDD:440233	108/330 (33%)